Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0372 ATGGTGCCTCACTTGTTGAACCAACTAAACCATTCTCAAAAATCTGCTTTTGCTGTTGCTTTCATCCTTCTGTTACCTCCTTTCTTCCCAAATCTCTTCCACCCTTTGGCTCGTTCTTCTCCTTCTATGTTCTCTGAGTGGATTGCTCCTAAGCCTAGGCATTTGGCTTTGATGGAGGGTGCTTTGCAACGCCATACTCCTGTGGAACTACATACTAATCTCTGGTCTCCCTTGGCCTACCAAGGATGGAAACCTTGTACAGACCCTCCAAAATCAACTTCATTACCGGAAAAGTCTAGGGGATATATCCAGGTTTTCCTCGATGGAGGATTGAACCAGCAGAGGATGGGGATATGTGATGCCGTTGCTGTCGCTAAAATTTTGAATGCAACGTTGGTGTTACCACATTTTGATGTGAATCCAGTTTGGCAAGATTTCAGTTCATTTGCAGATATATTTGACGTGGATCACTTCATTGATGTCCTCCGTGATGAAGTATCAATAATTAAAGAGCTTCCTAGTGACTACTCTTGGAGCACAAGGGAGTACTATGGCACGGGCATAAGAGCTACTAGGATTAAAACAGCGCCAGTTCAAGCTAGTGCCGACTGGTATATAGAAAATGTCTTGCCTATACTTCAGAGTTATGGAATTGCTGCTATTGCACCATTCTCTCACCGTTTGACATTCAACAACTTACCATCAGATATCCAGCGTCTTCGTTGTAAGGTCAACTTTCAAGCATTGAGCTTTGTTCCACATGTCAAAGAATTAGGAAACACCATTGTTCGTCGCCTCCGCCACACTCCTGGCGCTAACCAAGCAGAAGGGAATGGCTATCTGCTGGAGGAAACTGATCAATTTGGAAAACAGCAAACTGGGAAGTTCGTTGTGTTGCATCTGCGTTTTGACAAAGATATGGCTGCTCATTCATCCTGTGATTTTGGCGGGGGTAAAGCTGAGAGACTCGCTCTAGCTAAGTACCGGCAGGTTATTTGGCAGGGAAGGGTGATGAAAGCTCAATTCACCGATGAAGAGCTTAGAAGTCAGGGGCGTTGCCCACTAACTCCTGAAGAGATTGGATTGCTCCTGGCAGCTTTGGGGTTCAACAATAGAACTCGGCTTTATCTTGCATCCCACAAGGTATATGGTGGAGAAGCAAGGTTAGCAACTTTAACCAAATTATTTCCTCTTATGGAAGATAAGAAGAGCCTAGCCTCGGCAGAAGAACTGGCCAAGTTTACAGGAAAAGCATCATTATTAGCTGCTATTGATTATTATGTGAGCATGCACAGTGACATCTTCATTTCTGCCTCTCCAGGCAATATGCACAATGCTCTTGTGGGACACCGCGCTTATATGAATCTGAAGACTATCAAACCAAACATGGGATTGTTGGGCCAGCTATTTCAGAATAATAGCTTGAGCTGGTCAGAATTCCAGCATGCAGTTCTTGATGGACATAAGAACAGACAAGGACAGATAAGATTAAGAAAGGAGAGGCAATCAATTTATACATATCCTGCTCCTGATTGCATGTGTACAGCTTAA 1551 0.4391 MVPHLLNQLNHSQKSAFAVAFILLLPPFFPNLFHPLARSSPSMFSEWIAPKPRHLALMEGALQRHTPVELHTNLWSPLAYQGWKPCTDPPKSTSLPEKSRGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVLPHFDVNPVWQDFSSFADIFDVDHFIDVLRDEVSIIKELPSDYSWSTREYYGTGIRATRIKTAPVQASADWYIENVLPILQSYGIAAIAPFSHRLTFNNLPSDIQRLRCKVNFQALSFVPHVKELGNTIVRRLRHTPGANQAEGNGYLLEETDQFGKQQTGKFVVLHLRFDKDMAAHSSCDFGGGKAERLALAKYRQVIWQGRVMKAQFTDEELRSQGRCPLTPEEIGLLLAALGFNNRTRLYLASHKVYGGEARLATLTKLFPLMEDKKSLASAEELAKFTGKASLLAAIDYYVSMHSDIFISASPGNMHNALVGHRAYMNLKTIKPNMGLLGQLFQNNSLSWSEFQHAVLDGHKNRQGQIRLRKERQSIYTYPAPDCMCTA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0372 516 PIRSF UCP009360 3 516 IPR024709 -
Lal17g0372 516 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 3 516 - -
Lal17g0372 516 Pfam GDP-fucose protein O-fucosyltransferase 102 454 IPR019378 -
Lal17g0372 516 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 3 516 - -
Lal17g0372 516 CDD O-FucT_plant 102 459 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0372 Lal-Chr17 2479597 2486624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0372 74 514 Miscellaneous Gene Families AT1G22460 35.141 2.20e-90 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0372 - - mtr:MTR_3g100310 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0372 17 2479597 2486624 Lal17g0372 17 2479597 2486624 ECH