Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0364 ATGGATTCCACTGAAAAAGAAGCTATGCTTCACGATATCATTCTTCAAATCGCTATTTTCCTTCTCCTTATCTTAACTTTCCTCTTCTTGTTCGGTGTTCCTCAAAAACTTGTCAATAAATTCCGTTATAGATTGAAACCCACCACCAAAGCCAAACGCCACTTCGTCAAAGGCGCTCAGCTACTTAGCCAAGCCAGATCCTCCAAAAACCTACCCGCTTCGAATTCCGGTTCGGATTCCGGTTCGTTTTCCGGTTTGGTCCAAGAAGCGTTAGAAGAAGCTGATAAATCAATCGCGTTAAATCCGAAGGACGCAGCACCGTACCTTCTGAAATCGTTGGCGTTGGAGTTGCAAGGGTTTCGAACTTCGGCTCTTGAAACGATCGACATGGCTCTGTCTCCGTTAGCGGTTAAGTCACTGGAGGATGATGAAAGAGGTGATGCGCTTTTAAAGAGAGCTGAGTTGAAAAACGCGTTAAAGGTTGACTCGGTAGTTGAAGATTTGACTCAGGTGGTTAAGCTGAGTCCAAAGAATTTGAAGGGTTGGGTTCTGTTAGGAGAATGGTATGAAGGGAAAAAGATGGAAGATGAAGCTAAGAATGCTTATAACAAAGCACTTCAGATTGAACCGAGGTTGTCTATTGCTCAACAAGCACTTAACAGGTTGGCTTCATCGTAA 678 0.4381 MDSTEKEAMLHDIILQIAIFLLLILTFLFLFGVPQKLVNKFRYRLKPTTKAKRHFVKGAQLLSQARSSKNLPASNSGSDSGSFSGLVQEALEEADKSIALNPKDAAPYLLKSLALELQGFRTSALETIDMALSPLAVKSLEDDERGDALLKRAELKNALKVDSVVEDLTQVVKLSPKNLKGWVLLGEWYEGKKMEDEAKNAYNKALQIEPRLSIAQQALNRLASS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0364 225 Gene3D Tetratricopeptide repeat domain 83 163 IPR011990 GO:0005515
Lal17g0364 225 Gene3D Tetratricopeptide repeat domain 164 224 IPR011990 GO:0005515
Lal17g0364 225 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 222 - -
Lal17g0364 225 ProSiteProfiles TPR repeat profile. 179 212 IPR019734 GO:0005515
Lal17g0364 225 Pfam Tetratricopeptide repeat 180 210 IPR019734 GO:0005515
Lal17g0364 225 PANTHER - 10 222 - -
Lal17g0364 225 SUPERFAMILY TPR-like 86 220 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0364 Lal-Chr17 2419322 2419999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0364 - - lang:109327961 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0364 17 2419322 2419999 Lal17g0364 17 2419322 2419999 ECH