Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0340 ATGGATCCTTGCCCTTTCGTGAGGCTAACTGTCCGTAACCTTGCCCTAAAGATTCCCGTTGCTTCTAAACCTGCTCTTTCTGTTGTTCATCCTTCTTCATCTCCATGCTTCTGTAAGATTAAGCTCAAGAACTTTCCTCTTCAATCCGCCGTTGTTCCGTTCATTCCGCCGGAGAGTAACTTCCCTGACTCTCATTTTCACCCTATCGCTGCAACTTTCCATCTTAGCAAGTCTGATATCGATAAACTTGCCGGAAAATCTATCTTCGCTGGGAAGCTCTCAGTCAAAATATCGATCTACACCGGTAGACGAGGCACAACCTGCGGTGTTAACTCCGGGAGGTTGCTCGGTAAAGTTTCTGTTCCGATAGATCTGGCTGGAACTACAACGAAGGCTACGGTGTTCCATAATGGTTGGATTACGGTAGGGAAAGAAACGAAAGGCTCCTCTGCGCAGTTTCATCTGAATGTTAAAGCTGAACCGAATCCGAGATTCGTGTTTCAATTCGACGGCGAACCTGAATGTAGTCCTCAAGTTTTTCAGATCCAAGGGAATATCTCGCAACCTGTTTTCACTTGCAAGTTCAGTTTCAGAAACGGAGACCGAAATCAGCGTTCCCGGTCGTTACAGTCAGACCTAGGACGTTCTAGAAGCTGGATAAGTTCATTCGGTAGCGATCGTGAACGGCCTGGGAAAGAACGCAAAGGATGGTCTATTACAGTTCACGATCTTTCCGGTTCACCGGTCGCGGCCGCATCTATGGTCACTCCTTTCGTTGCTTCACCCGGTTCGGACCGTGTCAGCTGTTCTAACCCTGGTTCATGGCTCATTCTTCGCCCCGGTGATGGCACTTGGAAGCCGTGGGGGAGACTCGAGGCGTGGCGCGAGCGCGGTGGCTCCGACGGCCTTGGATACCGATTCGAGCTTATTCCGGACTCCAGCGGAAGTATGAGTGCCGCCGGAATTGTTCTCACTGAGTCCACGTTGAGCACTAGTAAAGGAGGAAAGTTTGTGATCGACTTAAGCAGCAAAGCTGGCAGCGGAACTAACGGCCGTGTCACTCCGGGAAGTGCGACTTCGCCGGTTAATAGCCCGAGGGGAAGCGGAGATTATGGTTACGGTCTTTGGCCTTATTGTATGTACAGAGGTTTTGTGATGTCGTCGACGGTGGAGGGTGAGGGAAAGTGCAGCAAGCCTACGGTGGAGGTTAGCGTACCGCATGTGAATTGCACGGAGGATGCGGCGGTTTTCGTTGCTTTAGCCGCCGCCGTTGATCTCAGCGTTGATGCTTGTAGGCTCTTCTCTCAACGGTTGAGGAAGGAACTGTGCCAGCAACTAGACTTACATGGCTGA 1353 0.51 MDPCPFVRLTVRNLALKIPVASKPALSVVHPSSSPCFCKIKLKNFPLQSAVVPFIPPESNFPDSHFHPIAATFHLSKSDIDKLAGKSIFAGKLSVKISIYTGRRGTTCGVNSGRLLGKVSVPIDLAGTTTKATVFHNGWITVGKETKGSSAQFHLNVKAEPNPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNGDRNQRSRSLQSDLGRSRSWISSFGSDRERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPGDGTWKPWGRLEAWRERGGSDGLGYRFELIPDSSGSMSAAGIVLTESTLSTSKGGKFVIDLSSKAGSGTNGRVTPGSATSPVNSPRGSGDYGYGLWPYCMYRGFVMSSTVEGEGKCSKPTVEVSVPHVNCTEDAAVFVALAAAVDLSVDACRLFSQRLRKELCQQLDLHG 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0340 450 Pfam Protein of unknown function (DUF1005) 1 443 IPR010410 -
Lal17g0340 450 MobiDBLite consensus disorder prediction 345 364 - -
Lal17g0340 450 PANTHER OS07G0133500 PROTEIN 1 445 - -
Lal17g0340 450 PANTHER OS08G0163500 PROTEIN 1 445 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0340 Lal-Chr17 2177621 2179854 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0340 - - gmx:100805268 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0340 17 2177621 2179854 Lal17g0340 17 2177621 2179854 ECH