Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0338 ATGGATTCTAAAGCACCACCCCAAGTTGAAGTAGATCAAAAAGAGGTAAATGGAGGGATGAAGATCAATAATGAAACAAGTAAGAATACAAAGAAGAACATTAAAAAGAAAAAATCTTTTTTGCCCAAGTTTGGTTGTTTCAGAATCGAATATGATGCCACTGGGGAAAGTTTTGATATGGAAGTTGTTGATGCTTCTGGACACAGTCCCAACCCAACTCACTTAATTATAATGGTCAATGGTCTCATTGGAAGCGCTCAGGATTGGAAATTTGCTGCAAAGCAGTTTCTTAAAAGGTATCCACATGATGCTATTGTACATTGTAGTGAAAGTAATTCTGCGAAGTTGACATTTGATGGTGTTGATGTAATGGGAGATAGATTAGCAGATGAAGTTATTTCAGTTATAAAACGTCACCCAAGTGTTCAGAAAATTTCATTTGTAGGTCACTCTTTAGGTGGCCTGGTAGCAAGGTATGCAATGGCCAAACTTTATGGGAAAGACATTACTATGAAACTTTCTGAAGGGAGTGGATATATTGAGAGTCATAATTCAGATAAAGAATGTCATGAATGGAAGTATGAAGGAAAAATTGCAGGGCTGGACCCCATAAATTTTATTACCTTTGCAACGCCACACCTTGGTTCCAGAGGGCATAAACAGGTTCCAATGCTATGTGGATTTAAGCCTCTGGAGAAAGCAGCATTTCGCTTTTCAGGGATTTTTGGTAAAACAGGAAAACATCTTTGTTTAGCTGATAAAGACAATGGAAAACCCCCTCTGCTTCTGCAGATGGTTCGTGACACTGAAGATATTAAATTCATGTCTGCTTTGCGGTCCTTCAAACGGCGTGTTGCATATGCAAATGTCCGATATGACAAGCTTGTTGGATGGAGTACATCATCTATAAGGCGTAAAAATGAGCTTCCAAAGCGCCGGAATCTTTCAAGACATGAGTGCTACCGGCATGTTGTAAATGTGGAGATAGCAAAGTCAACTCCACTTCCTGTTGAAATTCCAACAGAATCTGAAGTGAAGAGCAGATCCGGTAAACTTGACTGGGAAGAGGAAATGATCAGGAGCTTAACAACAATGAGTTGGGACCGGATTGATGTGACAAATTACTGTGTAGATTTTGATGGAGTAGATGTGATACAACATATGGTTGACAATTTTCAGTTATAG 1185 0.3907 MDSKAPPQVEVDQKEVNGGMKINNETSKNTKKNIKKKKSFLPKFGCFRIEYDATGESFDMEVVDASGHSPNPTHLIIMVNGLIGSAQDWKFAAKQFLKRYPHDAIVHCSESNSAKLTFDGVDVMGDRLADEVISVIKRHPSVQKISFVGHSLGGLVARYAMAKLYGKDITMKLSEGSGYIESHNSDKECHEWKYEGKIAGLDPINFITFATPHLGSRGHKQVPMLCGFKPLEKAAFRFSGIFGKTGKHLCLADKDNGKPPLLLQMVRDTEDIKFMSALRSFKRRVAYANVRYDKLVGWSTSSIRRKNELPKRRNLSRHECYRHVVNVEIAKSTPLPVEIPTESEVKSRSGKLDWEEEMIRSLTTMSWDRIDVTNYCVDFDGVDVIQHMVDNFQL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0338 394 Pfam Putative serine esterase (DUF676) 71 300 IPR007751 -
Lal17g0338 394 MobiDBLite consensus disorder prediction 1 33 - -
Lal17g0338 394 Gene3D alpha/beta hydrolase 69 333 IPR029058 -
Lal17g0338 394 PANTHER UNCHARACTERIZED 12 394 IPR044294 -
Lal17g0338 394 SUPERFAMILY alpha/beta-Hydrolases 70 304 IPR029058 -
Lal17g0338 394 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 12 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0338 Lal-Chr17 2161406 2165834 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0338 - - gmx:100784218 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0338 17 2161406 2165834 Lal17g0338 17 2161406 2165834 ECH