Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0331 ATGGACGTTGAAGCGGGGAAGGATGCGGTACTCGATGATGATGGCAAAATCAAAAGAACTGGGAATGTGCTAACAGCTACGACACACATAGTGACAGTGGTGGTGGGGGCAGGAGTACTGGCTCTAGCATGGGCAATGGCTCAGCTTGGTTGGATAGCAGGCATAGCCATTATGATTGCTTTTGCATGCATTTCCATTTACACTTACAATCTCATTGCCGATTGCTACAGATATCCACACCCTATCACTGGCAAGAGGAACTACACTTACATGCAAGCTGTTGGTGCATACTTAGGTCGAACAATGCATGTGCTTTGTGGATTGGTCGTATATGTGAAGCTTTCTGGGATTGCAGTGGGATACACAATAACTACTTCAACAAGCTTGGTGGCTATAAGGAAATCGATATGCTTCCATTATAAGGGCCATGAAGCTGATTGCAAGTTTTCAAATAATCCATATATGATTGCTTTTGGGATTGTGCAAATATTCTTCTCCCTAATCCCAAACTTCCACAAGTTAACTTGGCTCTCAACCATTGCTGCTATAACCTCTTTTGGATACGCCTTCATTGGAAGTGGCCTTTCACTCGCAATTGTGGTCCAAGGGAAAGGTGCACCAACGAGTATATCTGGAGTCAAAGTAGGGCCAGGACTATCAGCAGAAGATAAAATGTGGAATGTTTTCAGTGCTATGGGAAATATAGCACTTGCTAGTTCTTTTGCTACAGTTGTTTATGATATAATGGACACATTAAAGTCATACCCACCAGAAAACAAACAGATGAAAAAGGCCAACATGTCAGGTATCACAGTAATGACAATTTTGTTCCTACTCTGCGGTGGCCTTGGCTATGCTGCATTCGGCGATCACACACCGGGGAATATCCTCACCGGCTTCGGATTCTATGAACCCTTCTGGCTGGTTGCCCTGGGGAATGTATGCATTGTGATCCACATTGTTGGAGCATATCAGTTGATCGCTCAACCATTATTTCGTGTAGTTGAGATGGGTGCTAATATCATGTGGCCACATTCAACTTTCATAAACAAGGAGTACCCAACTAAATTGGGCAGCATAACATTCAGTTTCAACTTGTTTAGGCTAATATGGAGGACAATATTCGTGATAGTGGCTACAATTATTGCCATGGCAATGCCATTTTTCAATGAGTTCCTTGCTTTGCTTGGAGCAATTGGATTCTGGCCACTTGTTGTATTTTTTCCTATACAAATGCACATTGCCCAGAGTCAGATAAGAAGAGTGTCATTGAAGTGGTGTGTGCTCCAATTATTGAGCTTTGTGTGCTTCCTTGTTTCAGTGGCTGCTGCAATTGGTTCAATTCATGGAATTGCCAAGGATATCAACAAATACAAAATCTTCCAATATAAGCAATAA 1398 0.4242 MDVEAGKDAVLDDDGKIKRTGNVLTATTHIVTVVVGAGVLALAWAMAQLGWIAGIAIMIAFACISIYTYNLIADCYRYPHPITGKRNYTYMQAVGAYLGRTMHVLCGLVVYVKLSGIAVGYTITTSTSLVAIRKSICFHYKGHEADCKFSNNPYMIAFGIVQIFFSLIPNFHKLTWLSTIAAITSFGYAFIGSGLSLAIVVQGKGAPTSISGVKVGPGLSAEDKMWNVFSAMGNIALASSFATVVYDIMDTLKSYPPENKQMKKANMSGITVMTILFLLCGGLGYAAFGDHTPGNILTGFGFYEPFWLVALGNVCIVIHIVGAYQLIAQPLFRVVEMGANIMWPHSTFINKEYPTKLGSITFSFNLFRLIWRTIFVIVATIIAMAMPFFNEFLALLGAIGFWPLVVFFPIQMHIAQSQIRRVSLKWCVLQLLSFVCFLVSVAAAIGSIHGIAKDINKYKIFQYKQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0331 465 Pfam Transmembrane amino acid transporter protein 20 451 IPR013057 -
Lal17g0331 465 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
Lal17g0331 465 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0331 Lal-Chr17 2101626 2105656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0331 3 462 Organic Solute Cotransporters AT1G10010 53.348 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0331 K24917 - gmx:100781934 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0331 17 2101626 2105656 Lal17g0331 17 2101626 2105656 ECH