Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0319 ATGGCTTTCACGTCATTTCCTTCCATCAAAAACTCCATTTTAATGCCAACTATGGCTGTTTCTGATGGCATGTCTGATAACTTGAGGAATGGTTTTTCATTTAGAAACAGTTCTATATATAAAAGGCAACAAAATATTAAAGACTTGACCATTGTTAATGTTGCTAGTCCATTACCTTTGAGTGTTCCACAACCACCATCACCACCATCGAAGGAACCGTCAGGGACCACCGGTGGTGGCCAGCAACATGTTGCATGGACTAGTATCCCTCAAGAGAGATGGGAGGGAGAGCTTCATGTTCAAGGACAGATACCATTGTGGCTGAATGGAATATACCTAAGAAATGGGCCAGGCATGTGGCACATCGGTGACTACCACTTCAGACACCTCTTTGACGGCTACGCCACCGTAGTCAAGCTTCATTTTACGAACGGCCGGTTAATCGCCGGCCATCGCCAGATTGAATCTGAAGCCTATCAAGCTGCAAAGGTGAACCAGAAAATATGTTACCGTGAATTTTCTGAAGTGCCTAAGGCTGCAAATATTTTATCCTATGTTGGTGAGCTTGTAAACTTATTCTCCGGCGCCTCGCTCACCGATAACGCCAACACTGGCGTGGTAAAACTAGGTGACGGTAGAGTTGTTTGCCTTACTGAAACTCAAAAAGGGTCCATTGTGATAGACCCTGATACATTGGACACAATTGGAAAATTAGAGTATAGTGACTCTTTGGGTGGTCTTATTCATTCAGCACACCCTATTGTGACTGATACTGAGTTTTTGACTTTATTACCTGACCTTATAAAACCAGGGTACCTTGTTGTGAGGATGGAACCTGGTACCAATGAGAGGAGGGTGATTGGTCGGGTGGATTGTCGTGGTGGGCCAGCACCTGGTTGGGTACACTCTTTCCCTGTTACTGAACATTATGTTGTTGTGCCTGAAATGCCATTAAGGTATTGTGCTCAGAATTTGCTCAAGGCTGAGCCTACACCTTTGTACAAGTTTCAGTGGCACCCTGACTCCAAAGCTTTTATGCATGTTATGTGCAAGACTAGTGGAAACATTGTGGCAAGTGTGGAAGTGCCTTTGTTTGTGACATTCCATTTCATAAATGCATATGAAGAGGAAGATAAAGATGGGAGGGTGACAGCAGTTATTGTTGACTGTTGTGAGCATAATGCAGATACCACCATTCTTGATAAGCTTAGGCTACAAAACCTTCGCTCATTTAATGGTGAAGATGTTCTACCAGATGCTAGGGTTGGTAGGTTCAGAATACCACTGGATGGGAGTCCATATGGGAAATTAGAGGCAGCATTAGATCCAAAAGAACATGGGAAAGGCATGGACATGTGCAGCATAAATCCTAATTATTTGGGGAAGAAATATAGATATGCCTATGCATGTGGAGCACAGCGCCCTTGTAACTTTCCCAACACCCTCACCAAGCTTGATTTCGAGTTAAAGCGGGCTACAAACTGGCATGATGAAGGTGCTGTGCCTTCAGAACCCTTTTTTGTGGCTAGGCCAGGAGCAACAGAGGAAGATGGTGGTGTGGTAATCTCCATAATCAGTGAGAAAAATGGAGGAGGATATGCATTATTGTTAGATGGTTCCACCTTTCAAGAGATTGCTAGGGCTAAGTTCCCTTATGGACTTCCATATGGATTGCATGGATGCTGGGTTCCAAAAGAGTAA 1701 0.4403 MAFTSFPSIKNSILMPTMAVSDGMSDNLRNGFSFRNSSIYKRQQNIKDLTIVNVASPLPLSVPQPPSPPSKEPSGTTGGGQQHVAWTSIPQERWEGELHVQGQIPLWLNGIYLRNGPGMWHIGDYHFRHLFDGYATVVKLHFTNGRLIAGHRQIESEAYQAAKVNQKICYREFSEVPKAANILSYVGELVNLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPDTLDTIGKLEYSDSLGGLIHSAHPIVTDTEFLTLLPDLIKPGYLVVRMEPGTNERRVIGRVDCRGGPAPGWVHSFPVTEHYVVVPEMPLRYCAQNLLKAEPTPLYKFQWHPDSKAFMHVMCKTSGNIVASVEVPLFVTFHFINAYEEEDKDGRVTAVIVDCCEHNADTTILDKLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGKLEAALDPKEHGKGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKRATNWHDEGAVPSEPFFVARPGATEEDGGVVISIISEKNGGGYALLLDGSTFQEIARAKFPYGLPYGLHGCWVPKE 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0319 566 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 9 565 - -
Lal17g0319 566 MobiDBLite consensus disorder prediction 60 83 - -
Lal17g0319 566 Pfam Retinal pigment epithelial membrane protein 91 564 IPR004294 GO:0016702
Lal17g0319 566 PANTHER BETA-CAROTENE DIOXYGENASE 9 565 IPR004294 GO:0016702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0319 K17913 - gmx:100814148 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0319 17 2022032 2028858 Lal17g0319 17 2022032 2028858 ECH