Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0315 ATGTCAGGTGTAGAGTCCCAAAAAGAAGTTACTTTAAACTCTCACACCATGGATTTCAGTAACAAGGGATCATCTCTCCTTAGCTTAATGGACACTGAAAAAATAGAACAGCAACACCCCATTCATCTTCGTATCCAAACCCATAGAGAGATAATAAGTGAACAAGAGGTTGAGTTTACCTCTCCAAGGATTTCTGGCTCTGAAGGAACAATGTTTCAAACAATGCAAAACCCTTGTCCAGAATCACCATGGACACTTTCACCTCTCTCAACTCCTTCTCCTTCACTGATTTACCACTGCATCGCCTCCCTCCACCGCCATGAAGGGAACATCTACGCCATTGCAGCTTCAAAGGGATTAGTCTTCACTGGCTCTAACAGCACCAGAATCCGTGTATGGAAGCAACCGGATTGCATTGATAGAGGGTACCTCAAAGCAAGTTCTGGTGAGTACAAGTTCTCCTTCTCTGCATGGTTTCAGTATCCTTATAATTAA 495 0.4323 MSGVESQKEVTLNSHTMDFSNKGSSLLSLMDTEKIEQQHPIHLRIQTHREIISEQEVEFTSPRISGSEGTMFQTMQNPCPESPWTLSPLSTPSPSLIYHCIASLHRHEGNIYAIAASKGLVFTGSNSTRIRVWKQPDCIDRGYLKASSGEYKFSFSAWFQYPYN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0315 164 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 17 152 IPR045182 -
Lal17g0315 164 Gene3D - 46 157 IPR015943 GO:0005515
Lal17g0315 164 PANTHER OS01G0232200 PROTEIN 17 152 - -
Lal17g0315 164 SUPERFAMILY WD40 repeat-like 99 136 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0315 Lal-Chr17 1975097 1975591 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0315 - - gmx:100814685 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0315 17 1975097 1975591 Lal17g0315 17 1975097 1975591 ECH