Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0310 ATGATTAGAGTATTGGTCAAGTCAATGTGTATCGAAGAGCTTACAGTAATACAAAATTCAAATATACCATTTCTCTCTCACTCCTCAGATTCAATCGCAATCGCCATGCCGATTAGGGTTTTTCTAATTTTTCTACTCTTTCTCTCATTTACCAACCTCGCTTCTTCCCTTTATGAAGATCAAGTTGGTCTCATGGATTGGCACCAACAGTATATTGGGAAAGTGAAGCATGCTGTGTTTCATACTCAAAAGACTGGGAGAAAGCGTGTTTTAGTCTCCACTGAAGAGAATGTTGTAGCTTCACTCGACCTTCGTCGTGGAGAGATTTTTTGGAGGCATGTTCTTGGGACCAATGATGTTGTTGATGGACTTGACATTGCCCTTGGAAAATATGTCATTACTCTTTCATCTGATGGAAATATATTGAGAGCATGGAACCTTCCTGATGGGCAGATGGTTTGGGAGTCTTTTCTTCAGGGCTCAAAGGCATCAAAGTCAATATTGATTATTCCAGTAAGTTTGCCTTGTGACCTGGACACCATGGATCAAATCCTGGAAACAGCCCCTCCATTTGCGGAGAAAAATTTGAAAGCTGACAAGGATGATTTGATCATTGTTTTTGGTAAAGGGTGTCTCCATGCTGTTTCCAGCATAGATGGTGAAGTTCTGTGGAGGCATGATTTTGTGGGTGAAAGTATCGAGGTTAGCCATATCATTCACTCTCCTGATGTGATCCATGTAGCTGGTTTTGTTGGTTCTACAGAGTTTTATGTATATGGATTGGATGCTAAGAATGGGGAGCTGTTAAAGAACAATCATGCAGCACTTCCCTATGGTACTTTTGGGGAATTATTATTAGTCTCAAATGACATTCTTGTGTTATTGGATGATACAAGGTCAAATATAGTAACAATAAACCTAAAAAATGGAGAGATTAGTTACAACCGAAAACATATTTCAGACCTCATAAAGGATTCATCTGGACAGGCAGTAATATTACCATCAAGGCTTCCGGGAATGTTTGCATTAAAGATCAATTCCCATGTTCTTCTAGTTAAAATGACAAACGAAGGTGAGTTGGTTGTGGTGGACAAAATTAATAATGCAACAGCTGTTAGCGATGCTTTATTAATTTCTGAGGGTCAACATGCTTTTGCTTTTGTTCATCATGGAGACAATAAAATTCACCTCTCTGTAAAGGATGTCAATGATTGGAATGGTGATTTGCTTAAGGAAAGCATAGTAATAGACCATCAAAGAGGAAATATTGATAAAATTTTCATAAACAATTATGTAAGGACCGATAGATCTCATGGGTTTAGAGCACTGATGGTAATGGAGGACCATTCACTTGTATTGGTACAGCAAGGAGAAATTGTTTGGAGTAGAGAGGATGGTCTTGCATCAGTTGTAGATGTTACAACATCAGAACTACCTGTGGAAAAGAAAGGTGTATCTGTGGCAAAAGTGGAAGAGAACCTCTTCGAATGGCTTAAGGGACATGTGCTGAAGCTTAAAGGAACTTTGATGATCGCAAGCCCTGACGATGTAGCAGCTATTCAAGCAATAAGACTGAGGAGTTCTGAGAAAAGCAAGATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCAGGAAAGGTTTTTGCGTTGCATACTGGAGATGGACGTATAATTTGGTCTATTCTACTTCCTACTCTACGCAAATCAGAAGCATGTGAGCATCCAGTTGGGCTTAACATTTATCAGTGGCAGGTTCCACATCATCATGCGTTGGATGAGAATCCATCTGTCCTTGTAGTTGGGCGATGTGGACCAAGTTTGGCCGCTCCAGCTGTTCTTTCTTTCATTGATGCATACACTGGGTTGGAAGTAAATTCTTTAAGTCATGCTCATACAGTTGCTCAAGTTATTCCCTTGCCTTATACAGATTCAACTGAACAGCGTCTGCATCTAATTATAGATGTTAACCAACATGCATATTTATACCCAAGAACTCCCGAAGCCATCGATATTCTGAAACGCGAGTTTTCAAATGTATACTGGTATTCAGTTGAGTCTGATAATGGTGTTATTAGAGGTCATGGGTTGAAGAGCAACTGCAAAGCAGTGGATGAATACTGCTTTGACTTGAGAGACTTATGGTCTATAATATTCCCGTCTGAATCAGAAAAGATTATTGCAACAGTGACAAGACAATTAAATGAGGTTGTTCATACTCAAGCAAAAGTTATGACTGATTATGATGTCATGTACAAGTATATATCAAAGAATCTACTTTTTGTCGCAAATGCAGCACCAAAAGCCAGCGGGGAAATTGGAACAGCAACTCCGGAGGAGGCATGGTTGGTCATATATATCATTGATACTGTTACTGGTCGCATATTGCATCGCATGACTCACCATGGTTGCCAGGGTCCTGTTCGTGCCGTATTTAGTGAAAACTGGGTCGTCTACCATTATTTTAATCTCAGAGCACACAGATATGAGATGTCAGTTGTTGAGCTCTATGATCAGTCTCGGGCGGATAACAAAGATGTTTGGAGGTTTGTTCTCGGAAAGCATAATCTTACATCGCCTTTCTCTTCTTATTCTCGACCGGAAGTCACAACAAAATCACAATCATACTTCTTTACTCATTCCGTGAAAACACTAGAAACGACTTCAACCACCAAGGGTATAACCTCTAAGCAGGTTCTTATTGGAACAGTTGGTGATCAGGTTTTAGCACTTGATAAACGCTTTCTAGATCCAAGGCGCACTCTTAATCCCTCACAAGCTGAGAAAGAAGAAGGAATTATTCCTCTTACCGATTCATTGCCAATCATTTCTCAGTCTTATATTACCCATTCCCTCAAAGTGGAAGGTCTAAGAGGTATTGTAACAGTGCCTGCCAAGCTGGAGTCTACATCTCTCGTCTTTGTCTATGGAGTAGATCTATTTTTTACCCAGATTGCTCCTTCAAGGACTTATGATTCACTAACTGAAGATTTCAGCTATGCTCTACTTCTCCTAACAATTGTTGTACTCATAGCCGCAATTTTTGTTACCTGGGTATTATCAGAGAGGAAAGATCTTCAAGAGAAATGGAGATAA 3111 0.3979 MIRVLVKSMCIEELTVIQNSNIPFLSHSSDSIAIAMPIRVFLIFLLFLSFTNLASSLYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRRGEIFWRHVLGTNDVVDGLDIALGKYVITLSSDGNILRAWNLPDGQMVWESFLQGSKASKSILIIPVSLPCDLDTMDQILETAPPFAEKNLKADKDDLIIVFGKGCLHAVSSIDGEVLWRHDFVGESIEVSHIIHSPDVIHVAGFVGSTEFYVYGLDAKNGELLKNNHAALPYGTFGELLLVSNDILVLLDDTRSNIVTINLKNGEISYNRKHISDLIKDSSGQAVILPSRLPGMFALKINSHVLLVKMTNEGELVVVDKINNATAVSDALLISEGQHAFAFVHHGDNKIHLSVKDVNDWNGDLLKESIVIDHQRGNIDKIFINNYVRTDRSHGFRALMVMEDHSLVLVQQGEIVWSREDGLASVVDVTTSELPVEKKGVSVAKVEENLFEWLKGHVLKLKGTLMIASPDDVAAIQAIRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRIIWSILLPTLRKSEACEHPVGLNIYQWQVPHHHALDENPSVLVVGRCGPSLAAPAVLSFIDAYTGLEVNSLSHAHTVAQVIPLPYTDSTEQRLHLIIDVNQHAYLYPRTPEAIDILKREFSNVYWYSVESDNGVIRGHGLKSNCKAVDEYCFDLRDLWSIIFPSESEKIIATVTRQLNEVVHTQAKVMTDYDVMYKYISKNLLFVANAAPKASGEIGTATPEEAWLVIYIIDTVTGRILHRMTHHGCQGPVRAVFSENWVVYHYFNLRAHRYEMSVVELYDQSRADNKDVWRFVLGKHNLTSPFSSYSRPEVTTKSQSYFFTHSVKTLETTSTTKGITSKQVLIGTVGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFVYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVVLIAAIFVTWVLSERKDLQEKWR 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0310 1036 SMART ire1_9 197 227 IPR018391 -
Lal17g0310 1036 SMART ire1_9 537 568 IPR018391 -
Lal17g0310 1036 SMART ire1_9 244 273 IPR018391 -
Lal17g0310 1036 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 89 344 IPR011047 -
Lal17g0310 1036 Gene3D - 79 419 IPR015943 GO:0005515
Lal17g0310 1036 Pfam PQQ-like domain 85 163 IPR002372 -
Lal17g0310 1036 Pfam ER membrane protein complex subunit 1, C-terminal 818 1035 IPR011678 -
Lal17g0310 1036 PANTHER UNCHARACTERIZED 42 1036 IPR026895 GO:0072546
Lal17g0310 1036 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 543 927 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0310 Lal-Chr17 1939230 1946868 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0310 K23562 - gmx:100807708 1719.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0310 17 1939230 1946868 Lal17g0310 17 1939230 1946868 ECH
Lal17g0310 17 1939230 1946868 Lal21g0410 21 2842607 2850245 LSH