Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0300 ATGGTGTTCTACTTCAAAGCGCGCTCAGAAGCTGGCGATTTCACCATCTTCATGGGCCTTGACAAGTACGAGAACGAGGAACTCATCAGATACGGTTTTCCAGAAGATATTTGGTTTCATGTTGATAAGATGTCTTCAGCCCATGTTTATGTCAGACTGCATAAAGGTCAGGGCATTGATGACATAAGTGAAGGTTTACTGGAAGACTGTGTTCAGCTTGTCAAAGCAAATTCAATTCAAGGAAATAAGGTGAACAATATTGATGTTGTTTACACTCCCTGGTCTAATTTGAAGAAAACTCCTTCGATGGATGTTGGTCAAGTTGGTTTTTACAACTCAAAAATGGTTCGAACTGTGAGAGTGGAGAAGCGGATCAATGAGATTGTTAACAGGCTAAACAAGACAAAAGTGGAAAGAAAACCCGATTTGAAAGCTGAGCGAGAAGCAGTTAATGCAGCTGAAAGAGCTGAGCGAAAACTGCATCTGAGAGAAAAGAAACGCCGTGAGGAATTGGAAAGGCTCGAAAAGGAGAGACAAGCAGAGATGAGGAGCTACAAGGGTTTGATGGTCTCAGAAAATATGGTTTCCAATAAACAAATTGCATCAGGAAGCAAATCACTGCAGGAACTGGAGGAGGATTTCATGTAA 648 0.4151 MVFYFKARSEAGDFTIFMGLDKYENEELIRYGFPEDIWFHVDKMSSAHVYVRLHKGQGIDDISEGLLEDCVQLVKANSIQGNKVNNIDVVYTPWSNLKKTPSMDVGQVGFYNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKLHLREKKRREELERLEKERQAEMRSYKGLMVSENMVSNKQIASGSKSLQELEEDFM 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0300 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Lal17g0300 215 PANTHER OS01G0750500 PROTEIN 1 215 - -
Lal17g0300 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Lal17g0300 215 Coils Coil 153 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0300 Lal-Chr17 1876565 1879643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0300 - - gmx:100802228 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0300 17 1876565 1879643 Lal17g0300 17 1876565 1879643 ECH
Lal17g0300 17 1876565 1879643 Lal21g0403 21 2790920 2794498 LSH
Lal17g0300 17 1876565 1879643 Lal4g0271 4 1741821 1745116 LSH