Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0296 ATGGTTGGTATCCTTCATCTCCAACGGTTCCCTCTCTCCACCTTTATCCGCTCCTATTCCACTCCTTTCTCAACCCCTAAATTCCCCAAACGGAACGCTATTTTCTTCTCAACCCTAACCACACCACAACCAATCACCGATAACGATTCACCTTCCTCAGATTCTGAAACCCCTCACGTAGAGTTATCTATCGACAAGCTATTCATACCACCGGATACACGTGTCCCTGTTGATAGTGGTAGTGCTAGAATCCTCAAAGGTTCGAATATAGTGTTGAGCAATTACGCACGTGATTCTCATGTAGTTCAAGCTGATTATGTTAAAAGTAGTGTTAGAACTGAAGATTGTCCCTCTGATGGTCTTCCTGAGTTTGCTCTTGTTGGACGCTCTAATGTTGGAAAATCTTCACTCCTTAATTCCATTGTTCGTCGAAAGAAGCTTGCCCTAACTTCAAAGAAACCTGGAAAGACACAATGCATCAACCATTTCAAGATTAATGATAGCTGGTACCTTGTTGATTTACCTGGATATGGGTATGCATCTGCACCTCAGGAACTTAGAGTGAATTGGGACAATTTCACCAAGGACTATTTCCTTAATCGGTCAACCTTAGTTTCAGTTTTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAGATAGATCTCGATTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACTATAATCTTCACCAAATGTGACAAGCGGAAGAAGAGAAAGAATGGAGGCAGAAGACCAGAAGAAAATGTTAATGATTTTCAGGACTTGATACGGGGCTTCTTTGAAACAGTGCCTCCATGGATCATGACCAGTAGTGTTACCAATCAAGGTCGTGATGAGATACTCCTTCACATGGCCCAGCTACGAAACTACTGGCTCAAGCACTAG 915 0.4262 MVGILHLQRFPLSTFIRSYSTPFSTPKFPKRNAIFFSTLTTPQPITDNDSPSSDSETPHVELSIDKLFIPPDTRVPVDSGSARILKGSNIVLSNYARDSHVVQADYVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKINDSWYLVDLPGYGYASAPQELRVNWDNFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTIIFTKCDKRKKRKNGGRRPEENVNDFQDLIRGFFETVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0296 304 Hamap Probable GTP-binding protein EngB [engB]. 109 298 IPR019987 GO:0005525
Lal17g0296 304 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 57 301 - -
Lal17g0296 304 CDD YihA_EngB 123 297 IPR030393 GO:0005525
Lal17g0296 304 Gene3D - 98 300 IPR027417 -
Lal17g0296 304 Pfam 50S ribosome-binding GTPase 124 241 IPR006073 GO:0005525
Lal17g0296 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 300 IPR027417 -
Lal17g0296 304 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 105 292 IPR019987 GO:0005525
Lal17g0296 304 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 120 300 IPR030393 GO:0005525
Lal17g0296 304 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 57 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0296 Lal-Chr17 1849563 1852265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0296 K03978 - gmx:100784426 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0296 17 1849563 1852265 Lal17g0296 17 1849563 1852265 ECH