Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0283 ATGGGGTTCGAGAAGGAGGAATGTGAGAAGAAGTTGGTGTTTGTTTACTATGTTACTGGTCATGGTTTTGGCCATGCCACTCGTGTTGCTGAGGTGGTGAGACATTTAATCCTTGCTGGCCATGATGTGCATTTGGTCACTGCTGCTCCTGACTTTGTTTTCTTCCATGAAATTGAAATCAACTCTCCACGCCTATTCTTTCGCAGGGTGCTTTTGGACTGTGGAGCTGTCCAATCCGATGCTTTAACAGTTGATCGCAGGGCTTCCTTGGAAAAGTATTCTGAGACAGCAGTGAAGCCGCGTGCTAGTATCTTGGCAACAGAAATAGAGTGGCTGAACTCCATCAAAGCCGACTTAGTGGTTTCTGATGTTGTCCCGATAGCATGTCGTGCAGCAGCTGATGCGGGTATCCGCTCAGTTTGTGTGGCCAATTTCAGTTGGGACTTCATCTATGTAGATTATGTCATGGATGCTGGACCTACTTATCGTTCAATGATTTGGCAGATAGCTGAGGACTATTCCCATTCTGAGTTCCTGATTCGCCTTCCAGGATATTGCCCAATGCCTGCTTTTCGTGATGTTATTGACATACCTCTTCTTGTAAGGAGATTGTACAAAACTCCAAAAGAGGTGAGGGAAGAACTTGGGATAGCAGACGATGTGAAGCTAGTTATTCTCAACTTTGGTGGTCAGCCATCAGGATTGAAGCTAAAGGAGGAGTTCTTACCTTCTGGTTGGTTGGGCCTGGTTTGTGGTGCTTCTGACACCCAGGACCTTCCAGTAAACTTTAGAAAACTTGCCAAAGATGCATATACACCTGACATTATTGCAGCATGTGACTGTATGCTTGGAAAAATTGGATATGGCACTTTCAGTGAAGCCCTGGCCTACAAGTGTCCTTTTGTCTTTATACGTAGAGATTATTTCAATGAAGAACCTTTTTTGAGACATATGCTTGAGTATTATCAAGGTGGTGTTGAAATGATTAGGAGGGATTTACTCACTGGTCACTGGAAACCTTATCTTGAACGGGCGATAAGTTTGAAGCCGTGCTATGAAGCACCCATTGATGGTGGCAAGGTGGCAGCCCAAATCCTGCAGGAGACAGCTTCTGGAAAGAAATATGCATCAGATAAGCTTAGTGGAGCAAGAAGATTGCGCGATGCCATAGTTCTTGGGTATCAACTACAAACTGTCATTGGGCGGGATATTGCAATCCCAGAATGGTATTCAATGGCTGAAAACAAACATGGACACTCACCATCAGTTTCCCCTATGGATAATGGAAACTCTGTATTCAACTCGCATGCCCAAGACTTTGAGATTCTTCATGGAGATGTCCAAGGTCTTCCAGATACAGTGGATTTCTTGAAGAGCTTATCTGAACTGAATGAGAAACAAACAATACGTGAGCGTAAAGCTGCTGCGAATCTCTTCAACTGGGAGGAAGAAATTTTTGTGACAAGAGCTCCCGGAAGGTTAGATGTAATGGGTGGTATTGCTGACTATTCTGGAAGTCTTGTCCTGCAGATGCCGATCAAAGAAGCTTGTCATGTTGCTTTGCAAAGAATCCATCCAAGTAAGCATAGGCTATGGAAACATGCTGAAGCTCGCCATGATGATGAGGAAAAACAAAAGCCAGCCGCTGTCTTGCAAATTGTATCATATGGCTCAGAGCTAGGCAATCGTAGTCCAACCTTTGATATAGATTTATCTGATTTTACGGAAGGAGGGAAGCCAATCTCATATGAAAAAGCAAAGAAATACTTTGCTCAAGATCCTTCCCAAAAGTGGGCAGCATATGTTGCAGGCGCAATTGTTGTCTTAATGAATGAATTGGGTGTACATTTTGAAGATAGTATCAGCATGCTGGTTTCATCTGCTGTCCCAGAAGGGAAAGGTGTATCATCTTCTGCATCTGTGGAGGTTGCTAGCATGTCTGCTATTGCAGCTGCTTATGGACTAGATATCAGCATGAGAGATCTGGCATTGCTCTGCCAAAAGGTAGAAAATCACATTGTAGGAGCTCCATGCGGTGTCATGGACCAGATGACTTCAGCATGTGGTGAAGCCGACAAACTTCTTGCAATGATTTGCCAGCCTGCAGAGATTGTTGGCCTAGTAGAAATTCCCAAAAACATCCGGTTCTGGGGAATTGATTCTGGAATAAGACACAGCGTTGGAGGTGCAGACTACGGCTCTGTCAGAATTGGTGCATTTATGGGTCTGAAGATGATAAAGTCCAGAGCTTCTGAGTTATTGTCTGAGACATGTAGCGATGAGTTGGATTCTGATGAAATGAAGAAAGATGGTATAAAGCTGCTAAAAAAAGAAGCCTCATTAGATTATCTATGTAACTTGTCTCCCCACAGATATGAGGCACTTTATGCTGACATAATTCCTAAGTCCATTATTGGTGGAGCATTTTTAGAGAAATACAAAAATCACAATGATTCTGTCACTGTTATTAATCAGAAGTGTACTTATGGAGTGAAAGCTCCGAATAAGCATCCTGTCTATGAAAATTTCAGAGTCAAGACCTTTAAAGCACTGCTAAATTCAGCAACTTCAAGTGAGCAACTTACAGCCTTAGGAGAATTGCTATATCAGTGCCACTATAGCTATAGTGCTTGTGGACTTGGCTCTGATGGAACAGATAGGCTTGTACATATAGTACAAGAGTTGCAGCACAGTGCAGCATCTGAATCTGAAGGTGGAACATTATGTGGAGCCAAGATTACAGGTGGGGGTTCTGGTGGAACAGTTTGTGTAATTGGTAGAAATTGTCCCAAGAGCATTGAACAGATTTCCGAGGTTCAGAAGAGGTACCAAAAAGCCACCGGTTACTTGCCCTATATTTTTGAGGGTTCATCACCGGGTGCTGGAAAGTTTGGGTACCTAAAAATACGCTCTTGCTCTACTCCCCAGAATACTTAA 2937 0.4331 MGFEKEECEKKLVFVYYVTGHGFGHATRVAEVVRHLILAGHDVHLVTAAPDFVFFHEIEINSPRLFFRRVLLDCGAVQSDALTVDRRASLEKYSETAVKPRASILATEIEWLNSIKADLVVSDVVPIACRAAADAGIRSVCVANFSWDFIYVDYVMDAGPTYRSMIWQIAEDYSHSEFLIRLPGYCPMPAFRDVIDIPLLVRRLYKTPKEVREELGIADDVKLVILNFGGQPSGLKLKEEFLPSGWLGLVCGASDTQDLPVNFRKLAKDAYTPDIIAACDCMLGKIGYGTFSEALAYKCPFVFIRRDYFNEEPFLRHMLEYYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEAPIDGGKVAAQILQETASGKKYASDKLSGARRLRDAIVLGYQLQTVIGRDIAIPEWYSMAENKHGHSPSVSPMDNGNSVFNSHAQDFEILHGDVQGLPDTVDFLKSLSELNEKQTIRERKAAANLFNWEEEIFVTRAPGRLDVMGGIADYSGSLVLQMPIKEACHVALQRIHPSKHRLWKHAEARHDDEEKQKPAAVLQIVSYGSELGNRSPTFDIDLSDFTEGGKPISYEKAKKYFAQDPSQKWAAYVAGAIVVLMNELGVHFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAYGLDISMRDLALLCQKVENHIVGAPCGVMDQMTSACGEADKLLAMICQPAEIVGLVEIPKNIRFWGIDSGIRHSVGGADYGSVRIGAFMGLKMIKSRASELLSETCSDELDSDEMKKDGIKLLKKEASLDYLCNLSPHRYEALYADIIPKSIIGGAFLEKYKNHNDSVTVINQKCTYGVKAPNKHPVYENFRVKTFKALLNSATSSEQLTALGELLYQCHYSYSACGLGSDGTDRLVHIVQELQHSAASESEGGTLCGAKITGGGSGGTVCVIGRNCPKSIEQISEVQKRYQKATGYLPYIFEGSSPGAGKFGYLKIRSCSTPQNT 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0283 978 Pfam GHMP kinases C terminal 853 943 IPR013750 -
Lal17g0283 978 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 18 363 - -
Lal17g0283 978 Gene3D Glycogen Phosphorylase B; 15 168 - -
Lal17g0283 978 Gene3D Glycogen Phosphorylase B; 204 349 - -
Lal17g0283 978 PANTHER MEVALONATE KINASE/GALACTOKINASE 12 970 - -
Lal17g0283 978 SUPERFAMILY GHMP Kinase, C-terminal domain 713 963 IPR036554 -
Lal17g0283 978 Pfam GHMP kinases N terminal domain 624 689 IPR006204 GO:0005524
Lal17g0283 978 Gene3D - 819 949 IPR036554 -
Lal17g0283 978 PIRSF Gal_kin_glcsltr 4 974 IPR012369 -
Lal17g0283 978 PANTHER L-ARABINOKINASE 12 970 - -
Lal17g0283 978 Pfam Galactokinase galactose-binding signature 479 522 IPR019539 -
Lal17g0283 978 PRINTS Mevalonate kinase family signature 490 514 - -
Lal17g0283 978 PRINTS Mevalonate kinase family signature 627 649 - -
Lal17g0283 978 PRINTS Mevalonate kinase family signature 670 689 - -
Lal17g0283 978 PRINTS Mevalonate kinase family signature 910 927 - -
Lal17g0283 978 SUPERFAMILY Ribosomal protein S5 domain 2-like 483 703 IPR020568 -
Lal17g0283 978 Gene3D - 465 718 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0283 Lal-Chr17 1754124 1766009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0283 K12446 - gmx:100787860 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0283 17 1754124 1766009 Lal17g0283 17 1754124 1766009 ECH