Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0268 ATGGGTTACAAAACCTCTTCTTTTTCATGCTTGGCACTTTTGTTAGCTTTCTCTTCATGCATTCATGCATTTGACGTGATGAAAATTTTTGGGTCTGACCCAGAATTCAGCCAGTTTTCCAAAGCCATGAATGATACCAAGCTCGCGGAACAAATCAACAAACGCAACACCATCACTATCTTGGCCCTTAACAATGGTGCAATGAGTTCCCTTAATGGAAAATCACTTTCAACACTCAAGGACATTCTCAGCACCCACGTTCTTCTTGACTTCTATGACGAGAAGTCCTTCTTCTATGCTAACACCAACCATACTCAAATTGTTACTCTCTTCCAAGCTTCTGGTAAGGCCGTTTATGACCAGGGTTTCATCTATGTTTCCCTTATAAACGAGGGTGAGTTGGCTTTTGCTTCTGCTGTTAAGAATGCACCTTACAACTCATTGCTCGTCAGAACCCTAGGGTCACAACCCTACAACATTTCTGTTGTTGAGGTTTCTGCACCTATTATTGCACCAGGCATTGATGGAACACCAATAACTCTAGCCCCAGCTCCTTCTTCTCCCAAGTCCAATGCAACTGCACCAGGTGCTTCTGCAGAGGTACCAGCAGCTGAAGAAATATCTACCACCGCGGCTCCAGCACCTAGTAAGGTGGCTGAGTCACCGGTGGAAGCTGAGGCACCAGGTCCAGTGGCTGAAGAAGCCGCTGACACCACTGAAGCTGATGACAAAGCAGCACCAGCTTCTAGCAATGCTTCTACCACTCATTTTGGTTTGGTTGGTGCAGTTATGGCCTTGGCTTCACTTTTTATCTCTATGTAA 822 0.455 MGYKTSSFSCLALLLAFSSCIHAFDVMKIFGSDPEFSQFSKAMNDTKLAEQINKRNTITILALNNGAMSSLNGKSLSTLKDILSTHVLLDFYDEKSFFYANTNHTQIVTLFQASGKAVYDQGFIYVSLINEGELAFASAVKNAPYNSLLVRTLGSQPYNISVVEVSAPIIAPGIDGTPITLAPAPSSPKSNATAPGASAEVPAAEEISTTAAPAPSKVAESPVEAEAPGPVAEEAADTTEADDKAAPASSNASTTHFGLVGAVMALASLFISM 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0268 273 Gene3D FAS1 domain 23 176 IPR036378 -
Lal17g0268 273 MobiDBLite consensus disorder prediction 181 252 - -
Lal17g0268 273 SUPERFAMILY FAS1 domain 29 122 IPR036378 -
Lal17g0268 273 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Lal17g0268 273 Pfam Fasciclin domain 34 97 IPR000782 -
Lal17g0268 273 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 249 IPR033254 -
Lal17g0268 273 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
Lal17g0268 273 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0268 Lal-Chr17 1667404 1668225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0268 - - lang:109343689 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0268 17 1667404 1668225 Lal21g0372 21 2518130 2519050 LSH