Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0248 ATGGGTGAGAGTGAAATAATGATACCATGTATTGATTTTGGGAGGGGAATAGAAGAAGGTGGTGAGGCATGGAAAGAGATGAGTCATAAAGTGAGAGAAGCTTGTGAGAATCATGGTTGTTTCTTCATCATTATGAGTGATGATGTTGCAAGTGGTTTACGTGATCAAATGTTCATGCTAATGAAAACTTTGTTTAATCTGCCTGAAGAAATCAAACAGAAGCATTCAAGTTCAAAGCCTTATAGAAGCTACAATGGGAAGAGCCCTATCACTCCATTCTTTGAAAGCTTTGGTATTGATGATGCTCCTTTCTCAGATATCGCTCAGGCATTCACTAATCTCATGTGGCCACAAGGAAACCTAGTTTACTGTGAAACATTGAAGTCCATGAGTTCAAAGATGCTAGAATTGAGTTTCCTTATCATGAAGATGATTGTGGTGGGTTATGACCTTCCCAGCCATTACAGTTCAGATGCTGAAAACATGAAGAGCACTAGTCTTTTGAGGTTGATTAAGTATCATGGTCCTGAAGAAAGAAATGATGAGTCTGAGACTTCCTTGTTAGCTCACACTGACAAAAGTGCATTAACCATTCTATGTGAAAATGAAGTCCAGGCTCTGCAGGTGCAAACCAAAACAGGCAAATGGATTAACATTAAGATACCCCAACAAGGATTTCTAGTCATTGTTGGTGATGTTCTCAAGGCATGGAGCAATGGGAGACTTCATGCAGCTACACACAGAGTGGCGATGATAAGTGAAGAGAAAGAAAGGTACTCATTGGGGCTATTTGCTTCACCAAAGGATGAGATGAAGGTCAAGGTGCCCAATGAGCTGATTGATGGAAAAACACATCCTCTTCGTTACAAGCCATTCAATTATGGAGACTACATTCATTACTATGTTTCAACTCTCAAATATGATGCTCTTGAAGTGTTTGCAAGTGTTTGA 951 0.3975 MGESEIMIPCIDFGRGIEEGGEAWKEMSHKVREACENHGCFFIIMSDDVASGLRDQMFMLMKTLFNLPEEIKQKHSSSKPYRSYNGKSPITPFFESFGIDDAPFSDIAQAFTNLMWPQGNLVYCETLKSMSSKMLELSFLIMKMIVVGYDLPSHYSSDAENMKSTSLLRLIKYHGPEERNDESETSLLAHTDKSALTILCENEVQALQVQTKTGKWINIKIPQQGFLVIVGDVLKAWSNGRLHAATHRVAMISEEKERYSLGLFASPKDEMKVKVPNELIDGKTHPLRYKPFNYGDYIHYYVSTLKYDALEVFASV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0248 316 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 3 315 - -
Lal17g0248 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 267 IPR005123 -
Lal17g0248 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 315 - -
Lal17g0248 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 86 IPR026992 -
Lal17g0248 316 PRINTS Isopenicillin N synthase signature 190 211 - -
Lal17g0248 316 PRINTS Isopenicillin N synthase signature 226 252 - -
Lal17g0248 316 PRINTS Isopenicillin N synthase signature 293 311 - -
Lal17g0248 316 Pfam 2OG-Fe(II) oxygenase superfamily 170 265 IPR044861 -
Lal17g0248 316 SUPERFAMILY Clavaminate synthase-like 6 304 - -
Lal17g0248 316 Gene3D - 7 313 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0248 Lal-Chr17 1545851 1547159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0248 - - gmx:100817159 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0248 17 1545851 1547159 Lal4g0231 4 1460825 1461983 LSH