Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0240 ATGAGCTACACTAATAGCTCCTCAATGAACTTTGGTAGTGGAAATGTTAGAAGAACTTTTGAGTTTGGAAGGACTCATGTGGTTAGGCCTAAAGGGCAGCACCAGGCTACTATAGTTTGGCTACATGGCCTTGGTGATAATGGCTCAAGCTGGTCCCAGATTTTGGAAACTCTTCCTCTTCCAAATATCAAATGGATTTGCCCAACTGCTCCTAAGCGATCCTTATCCACATATGGTGGATTTTCTAGCACTGCTTGGTTTGATGCTGTGGAGATTTCAGAAGATGCTGCAGATGATTTGGAGGGTTTAGATGCTTCCGCAGCACACATTGCCAATCTTTTGTCAACTGAGCCTCGAAATGTCAAACTTGGTATCGGGGGCTTCAGTATGGGTGCTGCAACTGCACTTTACTCAGCTACATGCTATGCTTTGGGGCAGTATGGGAATGGAAACGCTTACCCTATCGACTTAAGTGCAGTTGTTGCTTTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTGAAACATCGGATTGAAGGGTCACGTGATGGCATAAGCCGTGCATCATCATTTCCCTTATTTCTCTGCCATGGCAGAGGTGACGATGTGGTTGCATATGAACACGGAGAGAAATCTGCAAGGATGTTGAGTTCAGCTGGGTTCCGGAATCTTTCATTTAGGAGCTACAATGGGCTGGGTCACTATACAATCCCGGAAGAGACTGATGAAGTTTGCAGCTGGCTAACTGCAAATTTGGGACTTGGAGGGTTTCAGTTGAACTAA 780 0.4564 MSYTNSSSMNFGSGNVRRTFEFGRTHVVRPKGQHQATIVWLHGLGDNGSSWSQILETLPLPNIKWICPTAPKRSLSTYGGFSSTAWFDAVEISEDAADDLEGLDASAAHIANLLSTEPRNVKLGIGGFSMGAATALYSATCYALGQYGNGNAYPIDLSAVVALSGWLPCSRTLKHRIEGSRDGISRASSFPLFLCHGRGDDVVAYEHGEKSARMLSSAGFRNLSFRSYNGLGHYTIPEETDEVCSWLTANLGLGGFQLN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0240 259 Gene3D alpha/beta hydrolase 14 252 IPR029058 -
Lal17g0240 259 SUPERFAMILY alpha/beta-Hydrolases 26 250 IPR029058 -
Lal17g0240 259 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
Lal17g0240 259 Pfam Phospholipase/Carboxylesterase 26 248 IPR003140 GO:0016787
Lal17g0240 259 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0240 Lal-Chr17 1484165 1489294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0240 12 255 Acyl Lipid Metabolism Gene Families AT5G20060 66.531 4.14e-129 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0240 K06130 - gmx:100811642 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0240 17 1484165 1489294 Lal17g0240 17 1484165 1489294 ECH
Lal17g0240 17 1484165 1489294 Lal4g0224 4 1410179 1415233 LSH