Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0228 ATGGTTATGGGTGAGAATCGGTTGATTGTGGAGGAGGATTTTGTAATTGCATCGGAAGAGATGAATCCTCCTCCACCGTCACCGAAACCATTGTTGATGAAGATCAATAGCATTGTTTCTATCAACAGTTGTAAAAGCTACAATAGGCTTCCTTCTCAACCCTTAACCCTATCCATTCTCAGATTAGATGCTTCTTTCTTCTATGTTGAAGTTTCAAAGAATGCAAGCGTTGGAGAGCTCAAACATGCTGTGGAGGCCATTTTTAGTCACATGCCTCAGAAAATATCATGGCCACTTGTTTGGGGGCAATTTTGCTTATGCTATGAGGGACATAGACTAGTTGTAGAAACAGATTATCTTAGAGATTATGGTATCCACGATGGTGACCAGCTTCGTTTCATTCGTCATGTATCCAACATTAGCAGTTCTCGAAGAAAGCGGTCGAAGAAACGAGTTATGAATTTGAAACAACACAGGAGGTCAACATCTCCATTGAGTGAATACCAACAGATAGAACATAGTGACGAGGATGATATAGACATAGAGAACGGGAAGATCCAGCATTGCAGTGAAGAAGAAGAATGCATTGAGAATAACAGATTAACAACAAGCTTATTTGGAGGGTTTTTGCCATACAGCCAGGTGATAGATGTTAGAAGAGCTAGAATTGAAAGCAGGAATTGTCCCTCGTTTATTGCCAGAGGTGTATTGGAAAGTATTAGTAACATTAGAAAGGTGTTATGCTTTGGCAAGAGGTGGCATTATTCTCCCAAAGATGCATGGAGAGACTATTGA 795 0.4038 MVMGENRLIVEEDFVIASEEMNPPPPSPKPLLMKINSIVSINSCKSYNRLPSQPLTLSILRLDASFFYVEVSKNASVGELKHAVEAIFSHMPQKISWPLVWGQFCLCYEGHRLVVETDYLRDYGIHDGDQLRFIRHVSNISSSRRKRSKKRVMNLKQHRRSTSPLSEYQQIEHSDEDDIDIENGKIQHCSEEEECIENNRLTTSLFGGFLPYSQVIDVRRARIESRNCPSFIARGVLESISNIRKVLCFGKRWHYSPKDAWRDY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0228 264 CDD Ubl_SNRNP25 55 136 IPR040610 -
Lal17g0228 264 SUPERFAMILY Ubiquitin-like 51 138 IPR029071 -
Lal17g0228 264 MobiDBLite consensus disorder prediction 142 169 - -
Lal17g0228 264 MobiDBLite consensus disorder prediction 142 157 - -
Lal17g0228 264 PANTHER - 38 259 - -
Lal17g0228 264 Gene3D - 50 145 - -
Lal17g0228 264 Pfam Ubiquitin-like domain 55 137 IPR040610 -
Lal17g0228 264 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 38 259 IPR039690 GO:0000398|GO:0005689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0228 Lal-Chr17 1414853 1417236 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0228 - - lang:109328116 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0228 17 1414853 1417236 Lal17g0228 17 1414853 1417236 ECH