Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0213 ATGTCCTCCCCTTTCCCTTCTTGCTTCCGCCCCTCCCATACCACCGACGACAACCACTACTTTTCACCTCCGCCGCCGCCACCGCCGCCTTCTACGAACCCTAATATCACAACCTATCTCTACCACACCGACATAGGTATCGTTTCTCTAACATGGTCACGCTCCATTCTAGGTCGTTCTCTCCACGTTAACCTCCACAACCACCCTTTCGAATCCCCTTCACTCCCTTCTCTCTCCTCCTTCCACCTCCACATCAAACCCTTCATCTTCTGGAAAAAACACGGCACCAAGAAACTCTCCTCCAACACCAACCTCTTCTGGAACCTCTCCAAGGCCAAATTCGGGTCGGGTCCCGAACCTAATTCCGGTTTCTACGTCGCCATCGTCGTCGACAAAGAGATGACTCTCCTCATCGGCGATTCCAAAAAAGACGCGTACGCGAAGTCTAAGGCAGTGGCACCGAAAAACTCACAGTTCCTCGTTCTGAAAAGAGAGCACGTGTTCGCGAACAAGGTTTACAACACGAGAGCGAGATTCGGTGGAAGGATGAGAGAGATTCAGATAGATTGTGGTGGTGATAGTTCGAGTCTTTGTTTCAGTTTTGACGGAAAAAAGGTGCTGCAGATTAAGCGGTTGAAGTGGAAATTCAGAGGGAATGAGAGAGTTGAAATTGAAGGTGTTCCTGTTCAGATTTCATGGGACGTGTATAATTGGCTTTTTGAGAAGGATAACAGTGACGGCCACGCAATTTTCATGTTTAAGTTTGAGGAGGAAGATGAGGAAGAACGAGGGGATAAGAGTTTGATGAATGTATGGACGCATCAAAATTTGAACTTAGGGTCTTATGAATGTGGCAAAATTTGCTCTACTTCTTCGGTTTCGATGACTTCGTCAACCGGTTCTTTCGGCGGAAGCTCATCGGTGTTGGAATGGTCTAGTGTGGAGGAGAATGAGTTAGTTATTCCCATTGGGTTTTCATTGCTTGTTTATGCTTGGAAGCGCTGA 1005 0.4756 MSSPFPSCFRPSHTTDDNHYFSPPPPPPPPSTNPNITTYLYHTDIGIVSLTWSRSILGRSLHVNLHNHPFESPSLPSLSSFHLHIKPFIFWKKHGTKKLSSNTNLFWNLSKAKFGSGPEPNSGFYVAIVVDKEMTLLIGDSKKDAYAKSKAVAPKNSQFLVLKREHVFANKVYNTRARFGGRMREIQIDCGGDSSSLCFSFDGKKVLQIKRLKWKFRGNERVEIEGVPVQISWDVYNWLFEKDNSDGHAIFMFKFEEEDEEERGDKSLMNVWTHQNLNLGSYECGKICSTSSVSMTSSTGSFGGSSSVLEWSSVEENELVIPIGFSLLVYAWKR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0213 334 MobiDBLite consensus disorder prediction 1 19 - -
Lal17g0213 334 MobiDBLite consensus disorder prediction 1 35 - -
Lal17g0213 334 PANTHER EXPRESSED PROTEIN 2 333 IPR008586 -
Lal17g0213 334 PANTHER OS08G0422401 PROTEIN 2 333 - -
Lal17g0213 334 MobiDBLite consensus disorder prediction 20 34 - -
Lal17g0213 334 Pfam Plant protein of unknown function (DUF868) 33 333 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0213 Lal-Chr17 1310627 1311631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0213 5 261 EF-hand Containing Proteins AT5G28150 35.821 7.37e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0213 - - cam:101507611 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0213 17 1310627 1311631 Lal4g0202 4 1261922 1262914 LSH