Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0199 ATGGCAACGGAGTTTACACCCAACCACCTCAGCCAATTCAACGGCACCGATCCATCCAAGCCCATCTACGTCGCCGTTAAGGGCCGCGTCTTCGACGTCACCACCGGCAAATCCTTCTACGGCCCCGGTGGTCCCTACGCCATGTTCGCCGGAAAAGATGCTAGCAGAGCCCTCGCCAAGATGAGCAAGAACGACGAAGATATCATTCCCTCTCTCGATGGCCTCTCTGAGAAAGAGATCGGAGTTCTTAATGATTGGGAGATCAAATTTCAAGCTAAGTACCCTGTTGTTGGTCGCGTTGTTCTTAATTAA 312 0.5192 MATEFTPNHLSQFNGTDPSKPIYVAVKGRVFDVTTGKSFYGPGGPYAMFAGKDASRALAKMSKNDEDIIPSLDGLSEKEIGVLNDWEIKFQAKYPVVGRVVLN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0199 103 Pfam Cytochrome b5-like Heme/Steroid binding domain 6 100 IPR001199 -
Lal17g0199 103 SMART Cyt_b5_2 5 101 IPR001199 -
Lal17g0199 103 Gene3D - 2 102 IPR036400 -
Lal17g0199 103 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 3 101 - -
Lal17g0199 103 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 101 IPR036400 -
Lal17g0199 103 PANTHER CALCUTTA CUP-RELATED 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0199 Lal-Chr17 1202473 1202784 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0199 K17278 - gmx:100813061 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0199 17 1202473 1202784 Lal17g0199 17 1202473 1202784 ECH