Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0198 ATGCATCACCCAACTAGTGTTCAACAAGAACACACCCTACTCCTTGATTTCGCTTCTCATTTTGCATTTAATTCTTCCAATTTTACCAACTTATTCTCACCCTCTTCTTCCAACTCTTCTATTCTATCCAATTCCTTGTCCTTCAACACCACTCGTGTCAGAAACTCTGCTTCTCTCAGATTGAAATTTGGAGGGAAAGGCGATTTCAATTTCAGGAAGATTTTCAATGACTTCAACACTGCAATTCGTTTTCAATGTCAAAAATTCCCAATTGGGTTTGATTCTGGGGGTATCAGTAACAATGATGGTAACAGTAATAATAGTGGGTTTAGAGAAGATGGGTGTGATGTTATTGAGAATGATAGAAATTCAGTGAATGGCGTTGAGGGTTATAAACCCAAAAGGGTTTTGATTTTGATGAGTGACACTGGTGGTGGTCATCGAGCTTCTGCAGAAGCTATCAAGGCTACTTTTTATGAACAATATGGAGATGAATATCAGGTGTTTATTTCTGATTTGTGGTCTGAACACACGCCTTGGCCATTTAATCAACTTCCTAAGAGTTATAGCTTTTTGGTGAAACATGCGCCTTTGTGGAAAATGGCTTATTATGGAACTGCCCCACGTGTAGTGCATCAGTCTAATTTTGCTGCAACTTCAACATTCATAGCTCGTGAGGTTGCTAAGGGACTAATGAAATATAAGCCAGATATAATAATCAGTGTGCATCCATTGATGCAACATGTTCCACTTCGTATTTTGAAGACAAAGGGTCTTTTAAAGAAGATTGTTTTTACCACTGTTGTCACAGATTTAAGCACCTGCCATCCTACATGGAACCATGTTGTTAGTTTAGTTTTAACATATTGGTGTCCGTTTCATAAGCTCGTAACCAGATGCTACTGTCCGACAACAGAACTTTCAAAAAGGGCACTCAAAGCTGGACTTCAGCAATCACAAATAAAGATTTATGGTCTACCTGTGCGACCCTCTTTTGTTAAGCCGGTTCAATCAAAGGATGATCTAAGGAGAGTGTTAGGCATGGATAAGGATCTTCCTGCCGTACTGTTGATGGGGGGAGGTGAAGGTATGGGCCCAATTGAGGCTACTGCGCGAGCACTTGGAGATATGTTATATGATGAGAGCCTTGGGGCTCCTATTGGTCAAATCCTTGTTATTTGTGGCCGAAATAAGAAGCTTGCTGACAAAATGCTTTCAATTAATTGGAAGGTTCCTGTTCAGTTAGCATATCACTCAGGTCCTGGTACAGCGATCAAGGGATTTGTCAACAAAATGGAAGAATGCATGGGAGCTTGTGATTGCATCATTACAAAGGCTGGTCCAGGAACGATTGCAGAGGCCATGATCCGAGGCCTGCCTATTATTTTGAATGGTTATATTGCTGGTCAGGAAGCTGGCAATGTACCCTACGTAGTTGAAAATGGTTTTGGCAAATTCTCTAAGTCTCCTAAAGAGATAGCAAAAATTGTTTCCGATTGGTTTGGGCCAAAAGCCGATGAGCTGAAAGCAATGTCACAAAATGCGTTAAAGCTAGCTAGGCCAGATGCTGTGTTCAAGATTGTTCAAGACCTTCATGAGCTTGTCAGACAAAGAAGTTTACATCCAGAGTACTCTTGTACAGCTTAA 1647 0.408 MHHPTSVQQEHTLLLDFASHFAFNSSNFTNLFSPSSSNSSILSNSLSFNTTRVRNSASLRLKFGGKGDFNFRKIFNDFNTAIRFQCQKFPIGFDSGGISNNDGNSNNSGFREDGCDVIENDRNSVNGVEGYKPKRVLILMSDTGGGHRASAEAIKATFYEQYGDEYQVFISDLWSEHTPWPFNQLPKSYSFLVKHAPLWKMAYYGTAPRVVHQSNFAATSTFIAREVAKGLMKYKPDIIISVHPLMQHVPLRILKTKGLLKKIVFTTVVTDLSTCHPTWNHVVSLVLTYWCPFHKLVTRCYCPTTELSKRALKAGLQQSQIKIYGLPVRPSFVKPVQSKDDLRRVLGMDKDLPAVLLMGGGEGMGPIEATARALGDMLYDESLGAPIGQILVICGRNKKLADKMLSINWKVPVQLAYHSGPGTAIKGFVNKMEECMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGFGKFSKSPKEIAKIVSDWFGPKADELKAMSQNALKLARPDAVFKIVQDLHELVRQRSLHPEYSCTA 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0198 548 CDD GT28_Beta-DGS-like 136 536 - -
Lal17g0198 548 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 147 328 IPR009695 GO:0009247|GO:0016758
Lal17g0198 548 Gene3D Glycogen Phosphorylase B; 337 519 - -
Lal17g0198 548 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 104 539 - -
Lal17g0198 548 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 534 - -
Lal17g0198 548 Pfam Glycosyltransferase family 28 C-terminal domain 411 463 IPR007235 GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0198 Lal-Chr17 1195235 1199911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0198 1 548 Glycosyltransferase AT4G31780 63.636 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0198 K03715 - gmx:100804814 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0198 17 1195235 1199911 Lal17g0198 17 1195235 1199911 ECH