Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0197 ATGGCTTTGGTTAATCCATTTCCGTTACACACCAAAACCTGTTTCCCTTTGCATCTTCCTTTTCCACCATCTTCCAACCAATACTCATCACAGTCACAACTTTCGTCTCTTTCTTCCCTTACCCATTCATTCAAACCATTATCATTATCAAGAAGGAACCATGGTCGGTGTGAAGCAGTGGCAGATATCAAAACTGAAACTTTGATTGATGGGGAAGATCATAAGGTTCTTGTAGGTCCTTCTAGTGAGGAAGAGAGAAGAGGTGATAGGGTAGTTGCTGATTATGATTGGGAAGAAGAATGGTATCCTTTGTACCTTACTCAGAATGTTCCTGAAGATGCACCACTTGGTCTCAAAGTTTTTGATAAGCAACTTGTGTTGTTCAAGGATGCTAATGACCAATTTCACTGTTATGAAGATCGTTGCCCCCACAGGTTAGCAAAACTATCTGAAGGGCAATTGGTAGATGGAAGGATAGAGTGCCTATACCATGGATGGCAATTTGAAGGCGAAGGCAAATGTGTGAAGATACCCCAGCTTCCAGCTGATGCCAAAATCCCTCGATCAGCATGTGTTAAAACATATGAGGTGAGGGACTCACAAGGTGTTCTTTGGGTATGGATGTCTAGAAAGACACCTCCGAATGTCAGCAAAATCCCTTGGTTTGAGAACTTTGCTAGGCCAGGGTTTCAAGATGTTTCAACAACTCATGAACTCCCATATGATCACTCTATTCTTCTGGAAAACCTGATGGATCCTGCCCATATCCCAATCTCACATGATAGAACAGACTGGACTGCAAAAAGAGAGGATGCACAACCACTGCTTTTTGAGGTAACCGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGCAAAGAGAAAGATGGGTCTAAGCCTAACTTCTTACGGTTCGGGGCTCCCTGTGTTCTACAAAATAACAGGGAAATTGTTGGTGAGAATGGTGAAAAAAACTACTTCACTGGTCTGTTCCTATGTACACCAACTGGGCAAGGGAAATCGTTGCTGATAGTGAGGTTTGGATCAACAATAAGATCCCCACTAGCGAAACTGTTCCCTAAATGGTACTTCCATCAGAATGCAAGCAAGGTTTTTGAACAAGACATGGGATTCTTATCATCCCAAAATGAAATTCTACTGAAAGAAAAGGTTCCCACAAAAGAACTGTATCTGAATCTAAAATCATCAGACACATGGGTTGCTGAATACAGAAAGTGGATGGACAAAGTGGGGCATGGGATGCCTTATCATTTCGGTCACAGCACTATTTCATTGCCCAAAGAACCTGCTGTGGTGGAACATGCACCGGCTGGCCTCGTTGCAGGACTATCAGCTTCCTCACCTGCCAAGGGGGGCATTGGAACAATGCATGCTCCAAACTTGGCCAATAGATATTTTAGGCATGTAATACATTGCAAGGGATGTAGATCTGTTGTCAAAGCTTTTCAATTTTGGAAAAATGCCCTTTCAGCTGTAGCCATCGTATTAGCCGCATCGGCAATTCTGGTATCTGGGAGACAATGGAAGGCACTTCTACTGGTATCTGCTTCATTGTGCTCTGCTGGTGTCTTTGCATGCTCAACCGCCATTACAATGAATACAACAAACTTTATCAGAACACATAGGAGATTGTGA 1656 0.4324 MALVNPFPLHTKTCFPLHLPFPPSSNQYSSQSQLSSLSSLTHSFKPLSLSRRNHGRCEAVADIKTETLIDGEDHKVLVGPSSEEERRGDRVVADYDWEEEWYPLYLTQNVPEDAPLGLKVFDKQLVLFKDANDQFHCYEDRCPHRLAKLSEGQLVDGRIECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLLFEVTERTDRGFAGWWGKEKDGSKPNFLRFGAPCVLQNNREIVGENGEKNYFTGLFLCTPTGQGKSLLIVRFGSTIRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCRSVVKAFQFWKNALSAVAIVLAASAILVSGRQWKALLLVSASLCSAGVFACSTAITMNTTNFIRTHRRL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0197 551 Pfam Rieske [2Fe-2S] domain 100 182 IPR017941 GO:0051537
Lal17g0197 551 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 53 551 - -
Lal17g0197 551 Pfam Pheophorbide a oxygenase 305 390 IPR013626 GO:0010277
Lal17g0197 551 Gene3D - 228 419 - -
Lal17g0197 551 SUPERFAMILY ISP domain 94 214 IPR036922 GO:0051537
Lal17g0197 551 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 101 206 IPR017941 GO:0051537
Lal17g0197 551 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 53 551 - -
Lal17g0197 551 Gene3D - 96 225 IPR036922 GO:0051537
Lal17g0197 551 SUPERFAMILY Bet v1-like 202 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0197 Lal-Chr17 1189878 1192625 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0197 - - gmx:100808233 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0197 17 1189878 1192625 Lal17g0197 17 1189878 1192625 ECH