Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0196 ATGAAGATAGCAGTGGAAGGATGCATGCACGGCGACCTAGACACCGTATACAAAACCCTTCAACATCTTGAAAAATGCAACAACACCAAAATCGACCTTCTCCTTTGTTGCGGTGATTTTCAGGCAGTTAGGAACAGTGATGATCTGAAGAGTTTGAACGTGCCTCCCAAATATCGCACAATGAACTCTTTCTGGAAGTATTATTCTGGCGCTGAGGTTGCTCCTTACCCAACTATCTTTATCGGTGGCAATCACGAAGCTTCTAATTATTTGTGGGAACTTTACTATGGAGGATGGGTTGCTCCTAATATTTATTTTTTGGGAGCTGCTGGTGTTGTTAGGTTTGGGAATGTTCGAATTTCTGGTCTTTCTGGAATTTATAATGCTCGTCACTATAATTTAGGACATTTTGAGAGGCCTCCCTATGATCAGAGTACTACCAGGTCTGTGTATCATGTTCGTGAATATGATGTTCATAAACTCAATCAAGTTCAGGAGCCCATTGATATTTTTCTTTCACATGATTGGCCGGTTGGGATCACTGATTATGGGGATTCGAATGAGCTTCTTCGGCGCAAGACTTACTTTAGGCAAGAGGTAGAGGAAAAAAGACTTGGGAGTAAACCTGCTGCTCAACTACTCGAAAAATTGAAGCCACATTATTGGTTTTCAGCTCACTTACACTGCAAGTTTCCTGCTCTTGTTCAACATGGGGAAGGGGGTCCACTGACAAAATTCCTTGCACTCGATAAATGTCTTCCCGGGCGTGATTTCTTACAGATTGTCGAAATTGAATCAGAGGAAGGACCTTTTGAGATTCACTATGATGAAGAATGGTTAGCCATAACAAGGAGGTTCAACTCTATCTTCCCACTGACAACCAAAGGTGCTGATTTCAGGGGAGTAAATCTTGGAATGGAAGATTGTCGTCAAATGGTTAGAAGCAGGCTTCAAGAGAGAGGGTGCAAACCTTTTGAATTTGTTAGAAAAGCTCCATGTTATGATCCTTCTAAATCCAACTTTCATGGTTCTTCTACTGTGCATTCTCGGAATCCTCAGACAGAGTCCCTTTTGCAGCTTCTAGAACTTCCATATCTTCTTGATAGCAATCCTGAATCAAAGGGCTTGTCACCGTATCCCTCTCCCTCAATTCAAAGAGGCCCTGTTGGTTATGACAGTGAGGACATTCCCATTGATGATGTGGATGATGATGACGACGATGATAAGGAGCTACCAAAAGTTGATGATGTGGAAACTGAGACTTTGAATTTGTAA 1275 0.4204 MKIAVEGCMHGDLDTVYKTLQHLEKCNNTKIDLLLCCGDFQAVRNSDDLKSLNVPPKYRTMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWVAPNIYFLGAAGVVRFGNVRISGLSGIYNARHYNLGHFERPPYDQSTTRSVYHVREYDVHKLNQVQEPIDIFLSHDWPVGITDYGDSNELLRRKTYFRQEVEEKRLGSKPAAQLLEKLKPHYWFSAHLHCKFPALVQHGEGGPLTKFLALDKCLPGRDFLQIVEIESEEGPFEIHYDEEWLAITRRFNSIFPLTTKGADFRGVNLGMEDCRQMVRSRLQERGCKPFEFVRKAPCYDPSKSNFHGSSTVHSRNPQTESLLQLLELPYLLDSNPESKGLSPYPSPSIQRGPVGYDSEDIPIDDVDDDDDDDKELPKVDDVETETLNL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0196 424 MobiDBLite consensus disorder prediction 395 413 - -
Lal17g0196 424 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Lal17g0196 424 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 409 - -
Lal17g0196 424 Gene3D - 8 245 IPR029052 -
Lal17g0196 424 CDD MPP_Dbr1_N 3 259 IPR041816 -
Lal17g0196 424 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
Lal17g0196 424 MobiDBLite consensus disorder prediction 371 424 - -
Lal17g0196 424 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Lal17g0196 424 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0196 K18328 - gmx:100812726 711.835