Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0184 ATGGCTAGTGAAAGAGATCTGTTTTCAACTGAGATAGTGAATAGAGGGATTGAATCAACTGGACCCAATGCAGGTTCAATGACATTCTCAGTGAGGGTGAGGAGGCGCCTGCCAGATTTTCTTCAATCAGTGAACCTTAAGTATGTCAAGTTGGGTTACCATTATCTCATAAACCATGGCATTTACTTGCTCACTATACCACTTCTTCTTGTGGTGTTCAGTGCTGAGGTTGGTAGTCTCAGAAAAGAAGATCTGTGGAAGAAGTTGTGGCAAGATGCAAGTTATGATCTTGCTACTGTCTTGACTTCCTTTGGTGTCTTTGTTTTCACCTTCTCTGTGTATTTCATGTCAAGGCCACGTCCTATATATCTCATGGATTATGCATGCTATCGACCTGAAGATGAACTCAAGGTGTCGAGGGAGCAGTTCATAGAGGTAGCAAGAAAATCAGGGAAATTTGAGGAAGAAACTTTGGAGTTCCAAAAAAGAATCCTAATGTCCTCAGGAATAGGGGACGAAACCTATATCCCAAAGGCAGTAATATCATCAACTGAAAACACAGCAACAATGAAAGAAGGTCGTGCAGAAGCATCAATGGTAATGTTTGGAGCACTAGATGAACTCTTTGAAAAAACAAGAATTCGTCCAAAGGACATAGGAGTGTTAGTTGTGAACTGCAGCATCTTCAACCCAACACCATCACTATCAGCAATGATAATAAACCATTATAAAATGAGGGGTAACATTTTGAGTTACAATCTTGGAGGTATGGGTTGTAGTGCTGGTATTATTGCTGTAGACTTGGCTAGGGATATTCTTCAATCTAACCCTAATAACTATGCTGTTGTGGTTAGTACTGAGATGGTTGGGTTTAACTGGTACCAAGGGAAAGAAAGGTCTATGCTTATTCCTAACTGTTTTTTTCGTATGGGTTGTTCTGCTCTTTTGCTTTCAAACCGTCGTCGTGATTATAGCCGTGCCAAATATCGTCTTGAGCATATTGTTCGTACTCATAAGGGTGCTGATGACCGTAGTTTCAGGTGTGTGTATCAAGAGGAAGATGATCAAAAATTCAAGGGACTAAAGATCAGCAAAGACTTGATTGAAATTGGTGGTGATGCCCTCAAAACCAACATCACCACACTAGGACCTCTAGTCCTACCCTTTTCTGAGCAGCTCCTATTTTTTGGGACATTAGGGTGGAGACACTTATTTGGTGGTAACAAAAAATCTGATGGAAACAATTTAGCATCATCAAAAAAGCCATACATCCCTGACTATAAACTAGCTTTTGAGCACTTTTGTGTGCATGCTGCAAGCAAGCCAATTCTTGATGAGCTTCAAAGGAACTTGGAGTTGAGTGACAGGAACATAGAGGCTTCTAGAATGACATTGCACCGTTTTGGAAACACTTCTAGCAGTAGCATTTGGTATGAGCTTGCTTACTTGGAAGCTAAGGAAAGAGTGAAAAAAGGTGACCGTATATGGCAACTGGCTTTTGGTTCTGGATTCAAGTGTAACAGTGTTGTTTGGCGTGCCATGCGTAGAGCCAACAAGGGTTCTAGGAACAACCCTTGGCTTGACTGCATCAACACATACCCTGTGTCTTTCACTTGA 1617 0.4131 MASERDLFSTEIVNRGIESTGPNAGSMTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPLLLVVFSAEVGSLRKEDLWKKLWQDASYDLATVLTSFGVFVFTFSVYFMSRPRPIYLMDYACYRPEDELKVSREQFIEVARKSGKFEEETLEFQKRILMSSGIGDETYIPKAVISSTENTATMKEGRAEASMVMFGALDELFEKTRIRPKDIGVLVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEMVGFNWYQGKERSMLIPNCFFRMGCSALLLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDDQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFGTLGWRHLFGGNKKSDGNNLASSKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDRNIEASRMTLHRFGNTSSSSIWYELAYLEAKERVKKGDRIWQLAFGSGFKCNSVVWRAMRRANKGSRNNPWLDCINTYPVSFT 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0184 538 SUPERFAMILY Thiolase-like 108 326 IPR016039 GO:0016746
Lal17g0184 538 PANTHER 3-KETOACYL-COA SYNTHASE 4 535 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal17g0184 538 Pfam FAE1/Type III polyketide synthase-like protein 114 399 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lal17g0184 538 Coils Coil 444 464 - -
Lal17g0184 538 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 538 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lal17g0184 538 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 432 512 IPR013747 -
Lal17g0184 538 SUPERFAMILY Thiolase-like 332 513 IPR016039 GO:0016746
Lal17g0184 538 CDD CHS_like 98 511 - -
Lal17g0184 538 Gene3D - 124 513 IPR016039 GO:0016746
Lal17g0184 538 PANTHER 3-KETOACYL-COA SYNTHASE 10 4 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0184 Lal-Chr17 1125922 1129171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0184 2 535 Miscellaneous Gene Families AT2G26250 75.410 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0184 K15397 - gmx:100818799 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0184 17 1125922 1129171 Lal17g0184 17 1125922 1129171 ECH