Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0152 ATGGCTATGCCTTCTGAGACTGAACCTGCGATCAAAAAGTATATTTCTTTGCAAGAACTGAGCATTCACAACAAAAAAGACGATCTTTGGATCTCAATCCATGGAAAGATCTACAATGTCACCAACTGGGCCAATCATCACCCTGGTGGTGACCTTCCATTGTTCAACCTCGCTGGCCAAGATGTTACTGACACATTTCTCGCATATCATCCCATCACTGCATCTAAATACCTTCACAACTTCTTCACTGGCTACTATCTCACTGATTACACTGTCTCTGAGGTATCCAAAGATTACAGAAAACTCTTGTCCCATTTTTCATCTATTGGCTTGTTTGATAATAAGGGGCACGGTGTTTTCCTCACACTGTGCTTCATGGTTTTCCTGTTTTCTGCTAGTGTTTATGGTGTTTTCTTTAGTGACGACCCTTTTGTGCATTTGGGTTGTGGTGGTTTGATGGGATTGTTTTGGATTCAGAGTGGTTGGATCGGACATGATTCCGGCCACTATCAGATTATGAAAACAAAGGCTTTCACTCGTTTTGCTCAGATCCTATCTGGGAATTGTCTTGCAGGGATTAGTATTGCATGGTGGAAGTGGAATCATAATGCTCATCACATTGCTTGTAATAGTCTTGATTTTGATCCAGATCTTCAGCATATGCCTTTTTTTGTGGTGTCTAATAAGTTTTTCAATTCCATTACTTCTTACTTCTATGACAGGAAGATGAACTTTGATGGTTTCACTAGGTTCCTTGTTAGTTATCAGCATTGGACTTTTTATCCTGTCATGTGCTTAGCTAGACTCAATTTATTTGCACAATCTTTCATCTTGCTGTTTTCCAAGAGAAAGGTACCTAATAGGGTCCAAGAACTTCTAGGGCTGCTTGTTTTTTGGATTTGGTACCCTCTTTTGGTGTCATACTTGCCCAATTGGAGTGAGAGAATATTGTTTGTGCTTGCTAGTTTTTCTGTCACTGGAATACAACATGTTCAGTTCTGCTTGAATCATTTCTCTTCAAGTGTCTATGTTGGCCACCCAACTGCTAGAGAGTGGGTTGAGAAGCAAACCAGTGGAACTCTTGATGTGAAGTGCTCACCTTGGATGGATTGGTTTCATGGCGGATTGCAATTTCAGGTGGAACATCATCTGTTTCCTCGGATGCCAAGGAATCATCTCAGGACAATTTCACCTTTTGTTAAGGAGCTGTGCAAGAAACATAATGTGTCCTACAATTGTGTCTCATTCTTGAAAGCCAATGTACTAACAATTCAAACCCTCCGAAATGCGGCCTTGCAGGCTCGCGATCTGTCCAATCCCATTCCCAAAAACTTGGTTTGGGAAGCTGTTAATACTCATGGGTGA 1365 0.4125 MAMPSETEPAIKKYISLQELSIHNKKDDLWISIHGKIYNVTNWANHHPGGDLPLFNLAGQDVTDTFLAYHPITASKYLHNFFTGYYLTDYTVSEVSKDYRKLLSHFSSIGLFDNKGHGVFLTLCFMVFLFSASVYGVFFSDDPFVHLGCGGLMGLFWIQSGWIGHDSGHYQIMKTKAFTRFAQILSGNCLAGISIAWWKWNHNAHHIACNSLDFDPDLQHMPFFVVSNKFFNSITSYFYDRKMNFDGFTRFLVSYQHWTFYPVMCLARLNLFAQSFILLFSKRKVPNRVQELLGLLVFWIWYPLLVSYLPNWSERILFVLASFSVTGIQHVQFCLNHFSSSVYVGHPTAREWVEKQTSGTLDVKCSPWMDWFHGGLQFQVEHHLFPRMPRNHLRTISPFVKELCKKHNVSYNCVSFLKANVLTIQTLRNAALQARDLSNPIPKNLVWEAVNTHG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0152 454 CDD Delta6-FADS-like 147 409 - -
Lal17g0152 454 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 10 90 IPR036400 -
Lal17g0152 454 Pfam Cytochrome b5-like Heme/Steroid binding domain 17 86 IPR001199 -
Lal17g0152 454 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 12 96 IPR001199 -
Lal17g0152 454 PANTHER FATTY ACID DESATURASE 2 12 453 IPR012171 GO:0016491
Lal17g0152 454 SMART Cyt_b5_2 15 87 IPR001199 -
Lal17g0152 454 Pfam Fatty acid desaturase 151 413 IPR005804 GO:0006629
Lal17g0152 454 Gene3D - 4 85 IPR036400 -
Lal17g0152 454 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 12 453 - -
Lal17g0152 454 PIRSF FA_sphingolip_des 1 441 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0152 Lal-Chr17 936117 937481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0152 12 454 Lipid Metabolism Gene Families AT2G46210 61.851 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0152 K21737 - jre:109021249 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0152 17 936117 937481 Lal17g0152 17 936117 937481 ECH