Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0151 ATGTCTAACCTACCTTCCAAACCCAACGGAAACGGAACAATTAACGGCAACGGCGCCGCACCTACCACCGTCAATGGTAACCCCGGCGGAGTAAAATCCCAGCTTTACAACCCAAACCGTCAAATCTACCGTCCTCAATCCCACTACAACCGCCGCCAACGCTCCAACCGCAACCTCTGCTGTTGCTGCTGCTTCTGGACAATCCTCACCCTCCTCGCCGTCGCACTCCTCGCAGCCATCGTCGGCGCCGCGCTCTACGTCCTCTACCGCCCCAACCGACCCGAATTCTCCGTCACAAATCTCCGCGTTGCAAAAATGAACCTCACCACCTCATCAGACTCACCTTCACACCTCAACACACTCTTCAACCTCACCCTCATAGCGAAAAACCCAAACAACCACCTCATCTTTTTCTATGAACCATTCACTGTAACTGTTTTCTCTAACTCCGTAGCAATCGGGAACGGGACTTTACCATCGTTTGAATCTGGTAAGAATAACCAAACGAGTGTGAAGAGCATTGTTTCAGGGTCAATGGATCTGGACACAGAATCGTTGAGTAGTTTGAGATCAGGGTTGAAGAAGGTGAAGGGGTTTCCAATGGAAATTCAAATGGATACGAAGGTGAAGATGAAGATGGAATCATTGAAGAGTAAGAAGGTTGGGATTAGAATCACGTGTGAAGGAATAAGAGGAAACGTGCCAACTGGTAAGTCTCCATCACTGGCTTCAGTTATCAACTCTCAGTGTAAGGTTGATCTCAGAATCAAGATCTGGAAATTCTCCTTTTAG 792 0.4836 MSNLPSKPNGNGTINGNGAAPTTVNGNPGGVKSQLYNPNRQIYRPQSHYNRRQRSNRNLCCCCCFWTILTLLAVALLAAIVGAALYVLYRPNRPEFSVTNLRVAKMNLTTSSDSPSHLNTLFNLTLIAKNPNNHLIFFYEPFTVTVFSNSVAIGNGTLPSFESGKNNQTSVKSIVSGSMDLDTESLSSLRSGLKKVKGFPMEIQMDTKVKMKMESLKSKKVGIRITCEGIRGNVPTGKSPSLASVINSQCKVDLRIKIWKFSF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0151 263 PANTHER HARPIN-INDUCED PROTEIN 5 262 - -
Lal17g0151 263 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 5 262 - -
Lal17g0151 263 SUPERFAMILY LEA14-like 75 171 - -
Lal17g0151 263 MobiDBLite consensus disorder prediction 1 37 - -
Lal17g0151 263 Pfam Late embryogenesis abundant protein 128 227 IPR004864 -
Lal17g0151 263 Gene3D - 88 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0151 Lal-Chr17 930104 930895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0151 38 256 EF-hand Containing Proteins AT5G21130 28.070 4.12e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0151 - - lang:109328718 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0151 17 930104 930895 Lal21g0265 21 1765228 1766019 LSH