Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0146 ATGGATCGTTTTCTCCTCTTTCTCATCGCTTCCCTCATCGCCACCGTTTCTAGTGGCCGTGACTTCACAGGAGATGTTCTCCGATTACCATCCGAAGAAGCTTCCATGTTCTTCAAAGCACCTAATAGCGATGAGAATGAAGAGGGGACGAGGTGGGCCATTTTAATCGCTGGTTCCAACGGTTACTGGAATTACAGGCACCAGGCTGATATTTGTCATGCGTATCAATTACTGAGGAAAGGTGGTCTGAAAGAAGAAAATATTGTTGTTTTTATGTATGACGACATTGCTTTCAATGAAGAGAATCCACGTCCTGGAGTTATCATTAACAGTCCTCATGGTGATGATGTTTACAAAGGAGTTCCAAAGGATTACACTGGGGAAGATGTTACTGTTAACAACTTCTTTGCTGCTTTACTTGGGAACAAGTCTGCTCTGACAGGTGGCACCAGAAAGGTTGTGGACAGTGGTCCCAATGATCATATATTTATATATTACAGTGATCATGGGGGTCCAGGGATGCTTGGGATGCCTACTTATCCTTACTTATATGCATCTGACCTGATCGAGGTTTTGAAGAAGAAACATGCTTCTGGGACATATAAAAGTCTTGTATTTTATCTAGAGGCATGCGAATCTGGGAGTATCTTTGAAGGTCTTCTTCCTGAAGGTCTAAATATCTATGCAACAACAGCTGCAAATGCAGAAGAAAGCAGTTGGGGAACATATTGCCCTGGGGAGTTTCCTAGTCCTCCTCCAGAATATGAAACCTGCCTGGGTGACTTATACAGTGTTGCTTGGATGGAAGACAGTGACATACACAATTTGCGAGCAGAAACTTTGCACCAACAATATGAGATGGTTAAACAAAGGACTATGAATGGAAATTCAATCTACGGCTCTCATGTGATGCAATATGGTGACATAGGGCTTAGTAAGGATCACCTCTTCCTCTATTTGGGCACAAATCCCGCTAATGATAATTTTACTTTTGTGGATGAAAACTCCTTGAGGTCACCTTCTAAAGCTGTCAACCAACGTGATGCAGATCTTATCCATTTTTGGGATAAGTTCCGCAAAGCTCCTCAGGGTTCCCCTAGGAAAGCTGAAGCTGAGAAACAGATTCTGGAAGTAATGTCTCATAGAATGCATGTAGACAGCACCATTAAACTTATTGGAAAGCTCTTATTTGGCATTGAGAAGGGTACAGAAGTGATCAGCAGTGTTAGACCTGCTGGGCAACCACTTGTTGATGACTGGAACTGCCTCAAAACATTGGTTAGGACTTTTGAAATGCATTGTGGATCCCTTTCTCAGTATGGAATGAAACACATGAGGTCCTTTGCAAACTTCTGCAATGCAGGAATAGAGAATGAGCAAATGGCTGAGGCCTCAGCACAAGCATGCACCACTTTTCCTGCCAATCCTTGGAGTTCACTGCACAGGGGTTTCAGTGCATAA 1461 0.4305 MDRFLLFLIASLIATVSSGRDFTGDVLRLPSEEASMFFKAPNSDENEEGTRWAILIAGSNGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIAFNEENPRPGVIINSPHGDDVYKGVPKDYTGEDVTVNNFFAALLGNKSALTGGTRKVVDSGPNDHIFIYYSDHGGPGMLGMPTYPYLYASDLIEVLKKKHASGTYKSLVFYLEACESGSIFEGLLPEGLNIYATTAANAEESSWGTYCPGEFPSPPPEYETCLGDLYSVAWMEDSDIHNLRAETLHQQYEMVKQRTMNGNSIYGSHVMQYGDIGLSKDHLFLYLGTNPANDNFTFVDENSLRSPSKAVNQRDADLIHFWDKFRKAPQGSPRKAEAEKQILEVMSHRMHVDSTIKLIGKLLFGIEKGTEVISSVRPAGQPLVDDWNCLKTLVRTFEMHCGSLSQYGMKHMRSFANFCNAGIENEQMAEASAQACTTFPANPWSSLHRGFSA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0146 486 Gene3D - 49 345 - -
Lal17g0146 486 PIRSF Legumain 1 486 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PRINTS Hemoglobinase (C13) cysteine protease signature 52 76 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PRINTS Hemoglobinase (C13) cysteine protease signature 77 106 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PRINTS Hemoglobinase (C13) cysteine protease signature 124 139 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PRINTS Hemoglobinase (C13) cysteine protease signature 152 171 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PRINTS Hemoglobinase (C13) cysteine protease signature 201 217 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PANTHER HEMOGLOBINASE FAMILY MEMBER 5 485 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 PIRSF AE 1 486 IPR043577 GO:0004197|GO:0051603
Lal17g0146 486 PANTHER VACUOLAR-PROCESSING ENZYME 5 485 - -
Lal17g0146 486 Pfam Peptidase C13 family 51 321 IPR001096 GO:0006508|GO:0008233
Lal17g0146 486 Gene3D - 346 474 IPR046427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0146 Lal-Chr17 906613 910646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0146 K01369 - gmx:100791675 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0146 17 906613 910646 Lal17g0146 17 906613 910646 ECH