Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0139 ATGCTCAACGATGCAGGCGAAACCCCCTCAAGGTATGAATTGTTGAGTATGGTGAAGAAGCACTCGAACTTAATTGAAAAAACGACGGTGGAGGAAATAGATGCTTCCGATGTAGAAATGGATATGAGATTCTGGCATGATGTCTTTGATTTGTATTTCGTCCGTGGTAAGGAATCACGTGGTCGACAAGATGATGATCTCGTTTTCTTTGTTAGAAAATCGGGTTCCCAAGGTTCTGGTTCCAATAGTAATACAGAGAGTGTTGATCCTTATTTTGTACGCAGGTGGGCACCTGAGTTGAGCAACTTAGTTGGTGAAACTTCTATAGATGTGGACTGGAGGCGTTCATTTTACTTGAATTTAATTGCTCATACATCATTCAGTGTAACTGTTGCAATTTGCAGTCACCAGGTTCTTCAGCACCATCAACCTGGGCAGAACACACCATTATCCCCTATATATAAGGAAGTGGAGACAACGCCAGCTTATCCGGATATATGTTTTGCAATTGATGATTTTGACTCCACTTTTGATGCTGTGGTTTTGACTGAAAAAGATCATTGCTTTTGTGTAGTTCTTAATGCACATGATGGGGCAGCATTACGTAATGAAAAGGTTGCAGATGATTACAGTACTAGTGGTGGATCTACTCTGAAAGTTGAAACTAGTTCTGCTAAGAAAAAAGATACAAAGCTTACCATTTTCTCAGGATTTGTCAGCTATCAGATGGTCCGAGATGCATATGATGCTGGTAAGTCTCGATTTGGGAGCCTTCTATCAGTTGGTCATTCTTCTGGAAAAACAGACAGGATTTGCATGAAAGGTCCAGCAGGCCGAGGGGAAGTTGAAGTAGCTGTTTCTGGTGTTGCAGATCAAAGTCAGCTGGATTCAGGCCCATTTTCCCCAGTTATATCAGAGAAAGGATTTGGGCTTGGCGCAATTGTCCGCAAAGCAGCATCGGTTGCATCAGTAGCGGCAAAACATGCTTATGAAGCCGCCTCTGCCTCTGGCTCCAATTTTGATGAAATGATACCTTTGAAATGCAACTTAATGTCCATATCATTGCCTTGGGAATATATTGTGCATGATCTTCTGTTTAAGGGAGCTCCTCCAGTGAATATGTGA 1125 0.4213 MLNDAGETPSRYELLSMVKKHSNLIEKTTVEEIDASDVEMDMRFWHDVFDLYFVRGKESRGRQDDDLVFFVRKSGSQGSGSNSNTESVDPYFVRRWAPELSNLVGETSIDVDWRRSFYLNLIAHTSFSVTVAICSHQVLQHHQPGQNTPLSPIYKEVETTPAYPDICFAIDDFDSTFDAVVLTEKDHCFCVVLNAHDGAALRNEKVADDYSTSGGSTLKVETSSAKKKDTKLTIFSGFVSYQMVRDAYDAGKSRFGSLLSVGHSSGKTDRICMKGPAGRGEVEVAVSGVADQSQLDSGPFSPVISEKGFGLGAIVRKAASVASVAAKHAYEAASASGSNFDEMIPLKCNLMSISLPWEYIVHDLLFKGAPPVNM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0139 374 Pfam Uncharacterized conserved protein (DUF2045) 42 289 IPR019141 -
Lal17g0139 374 PANTHER ZGC:172139 4 367 IPR019141 -
Lal17g0139 374 PANTHER ZGC:172139 4 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0139 Lal-Chr17 850687 856683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0139 - - gmx:100812574 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0139 17 850687 856683 Lal17g0139 17 850687 856683 ECH
Lal17g0139 17 850687 856683 Lal4g0154 4 957352 964647 LSH