Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0122 ATGGAAGGTTATCGATTAATGGAAGACAGTGAGATAAACGAAGGGTCAACCCTTACGGCAGAAAGAAATAAACAAGGCTTTGTGAATTCTGATGAGCACCGCAAGTTCGATGAATCATCACCATACGAAATTCTCCAAAATAATAAAGTTTCCATTGAGAACATAATCTCTGAGATGATCTCTATTAAAAGAGAGGGTAAATCCAAATCACACCTTCCAGAACTCGTTACTCAAATGTTCCTCCATTTCATCAATCTCCGCCAGGTGAATAGGTCTATTTTGATTGAGGAGGAGCGTGTGAAAATGGAAAGTGAGCGAGCGAAAGCACTGGTGGATTTTACGACATTGCAGCTTCATAATCTTATGTATGAGAAAAGTCACTATGTTAAAGGTATAAAGGCTTGTAAAGATTTCAAGTCCAAGTATCCTCACATTGAACTTGTACCAGAGGATCAATTTTTCTGTGAGGCTCCCCAGGATACTAAGGATTCTATTTTGTCCAACGACATTGCTCATAATTTGATGCTTAAGAGACTCACTTTTGAGCTATTCCAGCGCAAAGAGCTGTGCAAGCGTCATGAAAAACTGGAACAGAAAAAGAAAATTCTTTTGGAGACTATTGCTAACCGAAAGAAGTTCCTGTCAAGTCTCCCTTCGCATCTTAAGTCTCTCAAGAAAGCATCCCTACCAGTACAAAATCAACTAGGAGTTCTGCATTCTAAGAAACTAAAGCAGCATCATTCAGCAGAGTTGCTTCCACCAGCTCTTTACGTGATTTACTCTCAGTTGTTGGCTCAAAAGGAGGCCTTTGGACAACCCATTGACCTGGAGATCATAGGAAACCTAAAAGATGCTCAAACCTTTTCTTGTAATCAAGCTCACAAGGACACTGGCATTCCCACCAACGTGGATAGTTCCAAATCGGAAGATGATGCTCCTGATGAAGAGGAAGATGAGCAGAGACGGAGAAAAAGGCCAAGGCGTGTTCAAGGCAAGGAGAGTGTTGACCAAGCAGGAGTACTCCTAGTTCACCCACTTAAAGTCACTCTCCATGTGTATGATGACGAGGCTTCTGATTCCATGTCTTCAAAACTCATTACTCTTAAGTTTGTGTACTTAGTAAATCTAAATGTTGTATGCGTTGGAACAGAAGAATCTAATGATGGTTCCGAGAATGATATCTTATGCAATTTATTCCCCAATGATACAGGACTCGAGCTTCCTCACCAGTCAGCCAAACTCGTTGTAGGGGATGTTATGGTGTTTGATAGCCAGAGAACATCACGCCCATACAAATGGGCTCAACACCTGGCAGGAATTGATTTCTTGCCTGAGGTGTCTCCATTGCTTCTTACTGGTCGTGAAACTTCAGACGATGGTGAAGCCGTCAGGGGTGAAGATGTTATATCTGGTCTTTCATTATATCGTCAGCAGAACCGAGTCCAGACATTTTTGCAGAGAATTCGCTCAAGGAGAAAAGCCCAGTCCGCTCTTCTGTGA 1500 0.42 MEGYRLMEDSEINEGSTLTAERNKQGFVNSDEHRKFDESSPYEILQNNKVSIENIISEMISIKREGKSKSHLPELVTQMFLHFINLRQVNRSILIEEERVKMESERAKALVDFTTLQLHNLMYEKSHYVKGIKACKDFKSKYPHIELVPEDQFFCEAPQDTKDSILSNDIAHNLMLKRLTFELFQRKELCKRHEKLEQKKKILLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGVLHSKKLKQHHSAELLPPALYVIYSQLLAQKEAFGQPIDLEIIGNLKDAQTFSCNQAHKDTGIPTNVDSSKSEDDAPDEEEDEQRRRKRPRRVQGKESVDQAGVLLVHPLKVTLHVYDDEASDSMSSKLITLKFVYLVNLNVVCVGTEESNDGSENDILCNLFPNDTGLELPHQSAKLVVGDVMVFDSQRTSRPYKWAQHLAGIDFLPEVSPLLLTGRETSDDGEAVRGEDVISGLSLYRQQNRVQTFLQRIRSRRKAQSALL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0122 499 Pfam Fms-interacting protein/Thoc5 85 442 IPR019163 -
Lal17g0122 499 PANTHER FMS INTERACTING PROTEIN 23 498 IPR019163 -
Lal17g0122 499 Coils Coil 186 206 - -
Lal17g0122 499 MobiDBLite consensus disorder prediction 317 332 - -
Lal17g0122 499 MobiDBLite consensus disorder prediction 293 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0122 Lal-Chr17 738329 745107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0122 K13174 - gmx:100775509 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0122 17 738329 745107 Lal17g0122 17 738329 745107 ECH