Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0113 ATGGCTTCTAGCTTCGACCGCTGGGAAAAAGATCCTTTCTTTAACGCCGCCGAAGAAGTTCAGGAATCTTCAGACAGGATGGAATCTGCGTATAGGACATGGATTCACGCCAAGAAAGATCCTTTGAGCCCATGGAACAATGAGGAACTCCACCGAGATGTACATACTGCCCTTGGTACTGCTAAATGGCAGCTAGACGAATTCCAACATGCAGTTAGTTCAAGTTATAGTGAAAGCTCAAGTGAGGATGCTATAATTAGGCACCAAGATTTTATTTCTGCCATCGAGAACAAGGTTGCACAAATCGAGCATTCATTACGTGAATCTTCTCATTCCGGTGATAAGGCGCATCCGACATGGGTGCGTTTGGATGAAGGAGAACGAAATGAGCTTGCCTTATTTCTTTCAGGAATGCCTGCTTATGAAGGCAAAAGTCCCCGTAAATGTATCCGCAGTGGAAGTGAGAATCCACAATCAAGTGATAAAGATTCTTTCAGCAATGTTTCAGACAATGTGCGTGTCTCCTCTGGGCAGGGTTTGTCTGAAGCAATGGAGGTAAAATCACATGGGCATCGTAGAACAGCTAGCGCTGATGCTAATATTGCTTCTTGGAAAATTGCTGTTTCTGGTGATGTGCAAATCCGGAATTACTCCAATAATTCTTCTAGTCCTATGCACAAGGTAGCTAGTCTCTCTGGATTCCTTAATTCTATGGAATCTGTCTCTAAGTTGAAGTGGCCTAAGAATGGTTATCGGAAGCTGCAAACAGTGAATCATCATCAAGAAACAGATGACATGCTACTACCTACTACTCAATGTAATGGGGACATCAACACACACTATGAAAGAAGTAAGAGTTACCTTTTTAGTTGTGGTGAATGTTATGATAAGCAACTGTATGGGTGGTATGGGGCTATCCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAATACAGGCGTTCTGCTCAAATAACTGTCTGGATTATTATTCTCCTTTGCTTGGTTGTCTTAACTCCATCAGACACAGCATTGACTATTCGAACATTCAAAATAAAGATATTTGCAGAAAAGGAAGCTGACATTAAAAAGATGGGATAA 1101 0.4169 MASSFDRWEKDPFFNAAEEVQESSDRMESAYRTWIHAKKDPLSPWNNEELHRDVHTALGTAKWQLDEFQHAVSSSYSESSSEDAIIRHQDFISAIENKVAQIEHSLRESSHSGDKAHPTWVRLDEGERNELALFLSGMPAYEGKSPRKCIRSGSENPQSSDKDSFSNVSDNVRVSSGQGLSEAMEVKSHGHRRTASADANIASWKIAVSGDVQIRNYSNNSSSPMHKVASLSGFLNSMESVSKLKWPKNGYRKLQTVNHHQETDDMLLPTTQCNGDINTHYERSKSYLFSCGECYDKQLYGWYGAIQRQLQRSQYQMQYRRSAQITVWIIILLCLVVLTPSDTALTIRTFKIKIFAEKEADIKKMG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0113 366 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Lal17g0113 366 PANTHER EXPRESSED PROTEIN 1 338 - -
Lal17g0113 366 MobiDBLite consensus disorder prediction 142 178 - -
Lal17g0113 366 MobiDBLite consensus disorder prediction 151 178 - -
Lal17g0113 366 Gene3D - 9 110 - -
Lal17g0113 366 PANTHER OS05G0443700 PROTEIN 1 338 - -
Lal17g0113 366 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0113 Lal-Chr17 701955 705416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0113 - - lang:109343867 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0113 17 701955 705416 Lal17g0113 17 701955 705416 ECH