Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0109 ATGTTATATGTTATAAATAACCTTGAATCTCTCATCCGATTTCTTCCAAATTTGCATTCCCTTCCCTTGGATTACGTTTGTTCTCGTCTCATACCTACTCAGATTTCCATTCCATTCCATTCCATTCATGTAACACCTTTCTCCTTTATACTATCAATCCAAAGCGTTATCATGGGAAAGCGTAACTCTCAACGGAAAAGTGCTGCTGCTGCTGCTGCTTCTGCAATGTTTGACAGCGATGATGATAGTAGCGTCACTTCCTCTTCAACTACACGCTCTGATCTTATGTCCCTCTCTGGAACTGAAGATGTTTATTTTGATCAACATTCTTTGCTTGATCAAGCTCTCGATGCTTTAGATGAGAAAAGGAGTTCAACGAGGGAGAATGCTTTTTCATCCATAATTGAGGCATTCAATAGCAACATGCAGCATCAGTTTTTGGAAAAGAAATTTGCTACCTTGTTACATCAATGTCTTGCTTCAGTCAAAAAGGGATCCAAAAAGGCATCATCCAAGGAAATAGCTTTGGCTGCTCATGCCATTGGTTGTTTGGCTTTGACTGTTGGGTGTGGCAACAATGCACATGAAATATTTGAAGAATCAATACGTCCCATTGACGAATCTCTAGCATCTAAGTCAGATGTTTCAAAGATATCATCGTTACTAGAGTGCTTGGCTATAACCACTTTTGTTGGAGGCAATGATCCAGAGGAAACAGAGCGGTCAATGGATATAATGTGGCGAGTGATCCTTCCTAAATTAGGCTCCAATGTAGTTTCAGTCAAACCATCTGCTCCATTAATAACCGCTGTGGTGTCTGCGTGGTCTTTTCTTCTCTCTACCGTGAGCAACTTGAAGCTAAATTCAAAAAATTGGCAAAATTCAATATCCTATTTATCGACTCTTCTAGACAAGGAAGACCGGTCTGTACGTATTGCTGCTGGTGAAGCACTGGCTTTAATTTTTGAGATTGGAGTTATAGATAAATATTCTGCTGAGCCTAGGAGTGCAAGTGATACAACTGAAGAAGAGATCAAACCGCAGGAAAGTTACATATTCTTACAGGGATTGAAAGGGAAGGTCATAAATCAATGTAAAAACCTTGCTATGGAGGCTGGTGGAAAAGGATCTGCTAAAAAAGATCTCAATAATCAGCGGAATTTGTTCAGGGATATCTCAGATTTTTTTGAGTATGGCTACTCTCCTGAAATCTCAATGAAGATTGGGGGCGATTCACTGCAGACATCGTCGTGGTCCCAAGTGATACAGTTGAATTTTATCAAGCACTTCCTTGGGGGAGGGTTCACTAAGCATATGCAGGAAAATGAGTTCCTTCATGAGGTTTTTGATTTCACACCGAAGAGGAAGTGTCTGAATGGCAATGTGCATAGGATGTCTGATCTTGAAAAGAGAATGTTCAAGTCTCCAAATTCGGCACTGAACAAGGCCAGGACCCAGTTACTTGATAAGCAGAGGATGTTAACTGAGGGCAGAAAGGTAGGCCATTATGCAGTCAATATGGTTGATGACGAGGCATGA 1539 0.4081 MLYVINNLESLIRFLPNLHSLPLDYVCSRLIPTQISIPFHSIHVTPFSFILSIQSVIMGKRNSQRKSAAAAAASAMFDSDDDSSVTSSSTTRSDLMSLSGTEDVYFDQHSLLDQALDALDEKRSSTRENAFSSIIEAFNSNMQHQFLEKKFATLLHQCLASVKKGSKKASSKEIALAAHAIGCLALTVGCGNNAHEIFEESIRPIDESLASKSDVSKISSLLECLAITTFVGGNDPEETERSMDIMWRVILPKLGSNVVSVKPSAPLITAVVSAWSFLLSTVSNLKLNSKNWQNSISYLSTLLDKEDRSVRIAAGEALALIFEIGVIDKYSAEPRSASDTTEEEIKPQESYIFLQGLKGKVINQCKNLAMEAGGKGSAKKDLNNQRNLFRDISDFFEYGYSPEISMKIGGDSLQTSSWSQVIQLNFIKHFLGGGFTKHMQENEFLHEVFDFTPKRKCLNGNVHRMSDLEKRMFKSPNSALNKARTQLLDKQRMLTEGRKVGHYAVNMVDDEA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0109 512 Pfam Interferon-related protein conserved region 442 494 IPR006921 -
Lal17g0109 512 Pfam Interferon-related developmental regulator (IFRD) 87 397 IPR007701 -
Lal17g0109 512 SUPERFAMILY ARM repeat 95 324 IPR016024 -
Lal17g0109 512 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 58 504 IPR039777 -
Lal17g0109 512 Gene3D - 58 332 IPR011989 -
Lal17g0109 512 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 2-LIKE ISOFORM X1 58 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0109 Lal-Chr17 679594 684586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0109 - - gmx:100305376 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0109 17 679594 684586 Lal17g0109 17 679594 684586 ECH