Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0092 ATGGCAATGGCAACAACTATCCTCACTCCTCAGAGCATCACTGCAGGGACTATCATGAGTTCAACCACCAAGTCCAATAAGAGAATCATGCATGCAAGAGGGTTAAATTCATTTGTGGGATTGAAAACAAACAATGGTGTCATCTCTTTGGGGCTTCCTTTCAGCACTGAGAAGTGTTTTGCTAAGATTGTGAGTTCACTGAAGACTACATCATCAAATGGAAAAGGAAAGAGAGGTGGGGCATTCTCATCAACTTGCAATGCTGCAGGTGAGATTTTCACTATTGCTACTATCATCAATGCCCTTGTTCTTGTTGGGGTTGCAATTGGGTTTGTTCTCCTACGAATCGAAGCGTTTGTGGAGGAGCAGGAAGTAGAATGA 381 0.4304 MAMATTILTPQSITAGTIMSSTTKSNKRIMHARGLNSFVGLKTNNGVISLGLPFSTEKCFAKIVSSLKTTSSNGKGKRGGAFSSTCNAAGEIFTIATIINALVLVGVAIGFVLLRIEAFVEEQEVE 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0092 126 SUPERFAMILY PetM subunit of the cytochrome b6f complex 89 121 - -
Lal17g0092 126 Hamap Cytochrome b6-f complex subunit 7 [petM]. 88 121 IPR012595 GO:0009512
Lal17g0092 126 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 124 - -
Lal17g0092 126 Pfam PetM family of cytochrome b6f complex subunit 7 90 117 IPR012595 GO:0009512
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0092 Lal-Chr17 580291 580671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0092 - - gmx:100306520 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0092 17 580291 580671 Lal17g0092 17 580291 580671 ECH
Lal17g0092 17 580291 580671 Lal4g0110 4 683736 684620 LSH