Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0086 ATGTTGGAAGCAATGGAAGGTTCTATGAATGGTGGATTCTCACACTTTCAGAGCTGTGGGGATAGTAGCGAAGAGGAGCTATCTGTGCTGCCACGTCACACAAAGGTGGTGGTTACCGGAAACAACCGTACGAAATCGGTGCTTGTTGGTCTCCAAGGCGTGGTTAAGAAGGCCGTTGGACTAGGTGGATGGCATTGGCTGGTTCTTACAAATGGTATTGAAGTAAAGCTACAGAGGAATGCTCTTAGTGTGATTGAAGCACCAACAGGTAATGAGGAAGAAGATGACCTTGAATTTGAACATGTACGCTGGAACGGATCAGATATGGCATCGGACGACACACACAAGTCCCATAAATCGAGGCACAGAATGCATAGATCATTGGGATCATCTCCCAAGAGTAGGTCCTTCTCTGGTGATTCACAGTCTAAGGGGTCCATTTCTATGCCTCATGGGTCCACGGTTGACTTGGGCAAACTGGAGATAGCTGCTTTGTGGAGATATTGGCGACATTTCAAACTAGTTATTGCCGTCCCTAACCCTTCAAAAGAGCAGCTAGTAGATGTTGTTCAGAGGCATTTCATGTCGCAGCAAATGGACGAGTTGCAGGTAATTGTGGGATTTGTGCAAGCTGCAAAGAGGCTTAAGACTGTGTGCAAATGA 663 0.4661 MLEAMEGSMNGGFSHFQSCGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEEDDLEFEHVRWNGSDMASDDTHKSHKSRHRMHRSLGSSPKSRSFSGDSQSKGSISMPHGSTVDLGKLEIAALWRYWRHFKLVIAVPNPSKEQLVDVVQRHFMSQQMDELQVIVGFVQAAKRLKTVCK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0086 220 MobiDBLite consensus disorder prediction 107 150 - -
Lal17g0086 220 MobiDBLite consensus disorder prediction 130 150 - -
Lal17g0086 220 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 160 213 IPR025718 GO:0005515
Lal17g0086 220 Gene3D - 135 220 IPR038291 -
Lal17g0086 220 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 1 220 - -
Lal17g0086 220 PANTHER SAP30 1 220 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0086 Lal-Chr17 525554 555000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0086 - - gmx:100806535 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0086 17 525554 555000 Lal17g0086 17 525554 555000 ECH