Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0082 ATGCGAATTATAAAGAGACCTCTCTCTTTTTCTCTTTCTTATTTCTCTCCTCTTCTTTTCTATTCTCCTTCTTCATTCTCCGCTAAACCTCATTTCTCTCTTGCCACGTCACCAGGAGTTAAGCAGTTGCGTTGTCAATACTTAATGGATGGGAACAATGGAATTGGTGTACATGATGGAAGATCACCGGAATTGCCTGACAGTGAGAGTCGCAAGCAGCCACCTGTGTGGTCATCATCTTTTGGACATGGATGTAAGACTGATATAGGCAAGCAGATCTTTTGCAACAGGTCACTGAATATGAAGAACATTGTTGCTGTTGGGTTTGACATGGATTATACTCTGGCACAATACATGTCTGAAACTTTTGAGTCTCTTGCTTATCAAGGCACAATTAAAAAACTGGTTTATGATTTGGGGTACCCTCGAGAGCTACTAAACTGGACTTTTGACTGGAATTACATGGTCAGAGGCTTGGTTCTTGACAAAAAAAGAGGCAACATCCTGAAGATGGATCGCCACAAGTATGTGAAAGTAGCCTATCATGGATTTAAAGAGTTGTCAAAAGAAGTTAAAGTTGGGACCTATGGAAATACTTTAGTACGTGATTCTTTCGATGAGCCAGACTATGCTCTAATTGATACACTCTTTTCACTGGCGGAAGCCTACTTGTTTGCTCAACTGGTTGATTTTAAGGATGAGAATCCTGGAAAAATTCAAGAGGGTGTTGATTATGCTCGCATGTACAAAGATGTTCGAGCTGCAGTTGATTTGTGCCACCGTGACGGAACATTGAAGCAAATGGTTGCTAAAGATCCCAAAAGGTATATTAATGAAGACACTGCTATAGTGCCCATGCTTGAAATGCTTAGGGAATCCGGACGTGCGACATTTTTAGTGACAAACAGTTTATGGGACTACACAAATATTGTCATGAATTTCCTCTGTCGCTCCAACATGGCAGATGGCAGTAACAATTTTGACTGGCTTCAATACTTTGATGTTGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCTCGAAGAAAATCGTGCCAACCTGTTCCAGGTTGTCCCTGAGACTGGAATGCTACTTAATACAGATAATGGCTCTCCAGTGCCTCAGGTGGGTAGTGTCCCAGCAAGGTTATTCATGGACGATGAAAAGCATGCTTGTCCAGTTTTCCAGGGAGGCAGCGTTGGTCATCTCCATAAACTACTTTCCATTGAATCAAGTTCGCAGGTTCTGTATGTTGGGGATCACATTTATGGAGATATACTACGCAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATCCCTGAGCTTGAAAAGGAGGTTAAACTACTCTGGGAATCGAGGGATGCCCGCAAGGAGCTCCAAATCCTAAGGAGTGAGCGTGATTGTATTGAGGATGAAATACATCGTTTAAGGTGGTCTCTCAAATTCAAGAATCCAGATGCTGATGCCAAGCAGAATTTATCTTCAGAACTTGATAAATTGGAGCTTGAAAGAGAAAGAGTAAGATTGAGTCATCAAGAAGCTCAACGAAAATTACATCAACAGTTTCATGAGCCATGGGGCCAGCTTATGAAAACTGGTTATCAAAACTCTCGCTTTGCCCATCAGGTTGAAAGATTTGCATGCCTTTATACGAGTAAAGTGTCTAACCTGGCCTTGTTCTCTCCAAACAAGTACTACAGGCCCAGTGAAGACTTTATGCAGCATGAATTTGGAATTCTGGCTTATGAGCCAGCTGAAGTGTAA 1770 0.4181 MRIIKRPLSFSLSYFSPLLFYSPSSFSAKPHFSLATSPGVKQLRCQYLMDGNNGIGVHDGRSPELPDSESRKQPPVWSSSFGHGCKTDIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYMSETFESLAYQGTIKKLVYDLGYPRELLNWTFDWNYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEVKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDENPGKIQEGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPKRYINEDTAIVPMLEMLRESGRATFLVTNSLWDYTNIVMNFLCRSNMADGSNNFDWLQYFDVVITGSAKPGFFLEENRANLFQVVPETGMLLNTDNGSPVPQVGSVPARLFMDDEKHACPVFQGGSVGHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDARKELQILRSERDCIEDEIHRLRWSLKFKNPDADAKQNLSSELDKLELERERVRLSHQEAQRKLHQQFHEPWGQLMKTGYQNSRFAHQVERFACLYTSKVSNLALFSPNKYYRPSEDFMQHEFGILAYEPAEV 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0082 589 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 93 461 IPR008380 -
Lal17g0082 589 Pfam 5' nucleotidase family 93 579 IPR008380 -
Lal17g0082 589 Coils Coil 454 474 - -
Lal17g0082 589 Coils Coil 492 519 - -
Lal17g0082 589 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 25 582 - -
Lal17g0082 589 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 25 582 IPR008380 -
Lal17g0082 589 MobiDBLite consensus disorder prediction 58 79 - -
Lal17g0082 589 PIRSF NT5C2 72 588 IPR016695 -
Lal17g0082 589 Gene3D - 253 469 IPR023214 -
Lal17g0082 589 Gene3D - 89 138 IPR023214 -
Lal17g0082 589 SUPERFAMILY HAD-like 91 580 IPR036412 -
Lal17g0082 589 CDD HAD_cN-II 94 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0082 Lal-Chr17 496715 503106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0082 - - gmx:100796383 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0082 17 496715 503106 Lal17g0082 17 496715 503106 ECH