Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0079 ATGGGAACTCTGGGGAGAGTGATATACACCGTTGGATTCTGGATTCGTGAGACTGGCCAGGCCGTTGATCGCCTTGGTTCTCGCCTTCAGGGCAATTACTACTTCCAAGAGCAGTTGTCTAGGCATCGAACTCTGATGAACATATTTGATAAGGCTCCTTCTGTTGATAAGGATGCATTTGTTGCACCAAGTGCTTCCGTCATTGGTGATGTTCACATTGGAAGAGGTTCATCAATTTGGTATGGATCTGTCTTGAGAGGTGATGTTAATAGCATCAGTGTTGGAAGTGGAACTAACATACAGGATAACTCCCTTGTTCATGTTGCAAAGTCAAATTTAAGTGGGAAGGTGTTGCCCACTATTATTGGGAATAATGTTACTATAGGTCATAATGCTGTTATACATGGTTGTACTGTTAACGATGAGGCGTTTGTTGGTATGGGTGCAACGCTACTTGATGGTGTTGTTGTTGAGAAAAATGCCATGGTGGCTGCTGGAGCACTTGTGAGACAGAATACAAGGATTCCAAGTGGCGAGGTTTGGGCAGGAAATCCAGCAAAGTTCCTCAGAAAGCTCACTGATGAAGAGATAGTTTTCATCTCCCAATCAGCTATAAATTATACTAATCTTGCACAGGTCCATGCAGCTGAAAATTCGAAGTCTTTTGATGAAATTGAGTTTGAGAAGGTGTTGCGAAAGAAGTTTGCGCATAAAGATGAGGAGTATGACTCTATGCTAGGCGTTGTTCGTGAAATCCCACCAGAGCTTATCCTTCCCGAAAATGTCCTACCTGATAAAGGCGAAAAAGCTCTTCAAAAATGA 822 0.4282 MGTLGRVIYTVGFWIRETGQAVDRLGSRLQGNYYFQEQLSRHRTLMNIFDKAPSVDKDAFVAPSASVIGDVHIGRGSSIWYGSVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGNNVTIGHNAVIHGCTVNDEAFVGMGATLLDGVVVEKNAMVAAGALVRQNTRIPSGEVWAGNPAKFLRKLTDEEIVFISQSAINYTNLAQVHAAENSKSFDEIEFEKVLRKKFAHKDEEYDSMLGVVREIPPELILPENVLPDKGEKALQK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0079 273 CDD LbH_gamma_CA_like 54 212 - -
Lal17g0079 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 212 IPR011004 -
Lal17g0079 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 271 - -
Lal17g0079 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Lal17g0079 273 PANTHER DYNACTIN SUBUNIT P25 1 271 - -
Lal17g0079 273 Gene3D Hexapeptide repeat proteins 43 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0079 Lal-Chr17 479568 483243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0079 120 196 Miscellaneous Gene Families AT2G17640 33.721 3.49e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0079 K01726 - gmx:100777972 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0079 17 479568 483243 Lal17g0079 17 479568 483243 ECH