Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0076 ATGGGTTGTGTGAAAGGACCAATTGTAGTTTGCCCCAAAGTAGCAGGGTTATGCACTGTCCCTCCAATGATTGGACCAGTCAACGCTACGTGTATTAGAACTCAATTTCTTGGACTCACTTCTACCAAAATTAAGGTCAATTTCAACATGAGAAAGTGCAACACTGTGTATTGCAGTTTCAACTCCTCCTCAAATGGCACTGGAAGTATGGCTGAAAATTTTAATGAAAATGATGAAGACTATGTTAATTCTAGTGTTGTTGAATCTGTTGAGGTGAAGAGTGGAGCAGAAGGTTTCATGATAAAGATGAGGGATGGTAGAGAGTTAAGATGCATTCATAACAACCCTGATGGAGGAATTCTTCCAGATTATGCACCTCATCCTGCTATTGTCTTGAAGATGGAGGATGGGACTGGTTTACTTCTCCCCATTATTGTTTTGGAGATGCCAAGTGTCTTACTAATGGCAGCAATACGCAATGTTCAAATAGCTAGGCCTACTTTATATCATGTAGTGATGGAGATGGTTGACAAAATGGGATACAAAGTTGGAAATGAGGCAGAATGCATGAGTTTTAACCTTCGACCTTCAGATGCTATTAACATTGCAGTGAGATGCCAGGTGCCAATACAAGTCAACAAGTACTTGGCATACAGTGATGGAATGAGAGTAATTGAACCAGGCAAACTATTAACACAATCACCTGGTTCAGATGGCCAATTATTTACTGAACTGGACCGACCAAGTGGTAAACCTTGTACCGAAACCAAGGAGTTCGACCTTTTGCACAACATGTTGAAAGCTGTTGTTGAAGAGCGCTATCAAGATGCTGATCCTGGACACTTTAAATTGTATATACAATCCAAAACTAGCTGCCAATGGGAATTGGTAGAACAGATAGTTGTCATATCTCTACTTCCGCCTACATACACAGCCTAA 939 0.4068 MGCVKGPIVVCPKVAGLCTVPPMIGPVNATCIRTQFLGLTSTKIKVNFNMRKCNTVYCSFNSSSNGTGSMAENFNENDEDYVNSSVVESVEVKSGAEGFMIKMRDGRELRCIHNNPDGGILPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRNVQIARPTLYHVVMEMVDKMGYKVGNEAECMSFNLRPSDAINIAVRCQVPIQVNKYLAYSDGMRVIEPGKLLTQSPGSDGQLFTELDRPSGKPCTETKEFDLLHNMLKAVVEERYQDADPGHFKLYIQSKTSCQWELVEQIVVISLLPPTYTA 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0076 312 PANTHER VON HIPPEL-LINDAU PROTEIN 1 183 - -
Lal17g0076 312 PANTHER VON HIPPEL-LINDAU PROTEIN 182 277 - -
Lal17g0076 312 Gene3D Bifunctional nuclease domain 117 183 IPR036104 GO:0004518
Lal17g0076 312 Gene3D Bifunctional nuclease domain 184 228 IPR036104 GO:0004518
Lal17g0076 312 SUPERFAMILY Hypothetical protein TM0160 111 227 IPR036104 GO:0004518
Lal17g0076 312 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 182 277 - -
Lal17g0076 312 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0076 Lal-Chr17 471005 475041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0076 - - gmx:100807950 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0076 17 471005 475041 Lal17g0076 17 471005 475041 ECH