Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0059 ATGAGGAAGTGGACTCTACCTTCCGCTGTCTTTCTCCTCTCTCTTCTCATTCTCATTTCAGATCAAGGTCGAAAGATTGAAGCGAATGCTGAGAGTGATTCGGAAGAGGTTGTAGATCTACCTAAGGTGGAGGACAAAATCGGTGCAGTTCCATCTGGTCTTTCAACCGATTCAGATGTGGTTAAGAGGGAGGCTGAGTCGATCTCAAAGAAATCGCTTCGCAGCAATGCGGAGAAGTTTGAGTTCCAAGCTGAAGTTTCGCGTCTTATGGATATTATTATCAATTCTCTCTACAGTAACAAGGACATTTTCCTTAGAGAATTGATCTCCAATGCATCTGATGCGTTGGACAAGATTAGGTTCCTCTCTCTTACGGATAAGGAGATTTTGGGTGATGGCGATAATGCTAAGCTTGAAATCCAGATTAAGTTAGACAAGGAAAAGAAAATCCTATCTATTCGAGACAGAGGTATTGGTATGACTAAGGAAGACTTAATAAAGAATTTGGGGACCATAGCAAAATCCGGAACCTCATCTTTTGTTGAGAAAATGCAGAAAACTGGAGACCTCAACCTTATTGGGCAGTTTGGAGTTGGTTTCTACTCTGTGTATCTTGTCGCAGATTATGTTGAAGTCATTAGTAAACATAATGATGATAAACAGTATGTGTGGGAATCTAAAGCTGATGGAGCGTTTGCAATTTCAGAAGATACATGGAATGAACCTCTAGGACGTGGAACTGAGATTAGGATACACCTCAGAGATGAGGCTGGGGAGTACTTGGAAGAGTTTAAGCTTAAAGAATTGGTGAAGAAATACTCTGAATTTATTAACTTCCCTATCAATCTTTGGGCAAGTAAAGAGGTTGATGTGGAGGTTCCCGATGATGAAGTCGAGTCTAGCGAGGAGGAGGAAGAGGAATCATCTAAAGCCAGCTCCGAGGAAGAAAGTGAAGATGAAGATGCTGAAAAGAAGCCCAAGACAAAGACCGTGAAGGAAACAACTTATGAGTGGGAACTTTTAAATGATGTGAAAGCTATATGGTTGCGGAGTCCAAAGGACGTTACAGATGAAGAGTACAACAAATTCTACCACAGTCTTGCCAAGGATTTTAGTGATGAGAAACCTGTAACATGGAGTCACTTTGCTGCGGAAGGCGATGTTGAGTTCAAGGCTGTCCTGTTTGTGCCACCTAAAGCTCCTCATGATTTATATGAGAGTTATTATAATTCAAATAAATCCAACCTGAAGTTGTATGTTAGAAGAGTCTTTATTTCAGATGAATTTGATGAATTGTTGCCAAAATACCTCAGCTTTTTGCAGGGTCTTGTTGATTCTGACTCATTGCCACTTAATGTATCACGAGAAATGCTTCAACAACACAGTAGTCTAAAGACAATCAAGAAGAAACTTATAAGGAAAGCCCTCGATATGATCCGGAGGATTGCCGAGGAGGATCCCGACGAGTCCAATGACAAAGACAAGAAAGAAGAGGTATCATCTGACAATGATGAGAAAAAAGGTCAATATTCTAAGTTCTGGAATGAGTTTGGGAAGTCCATTAAACTTGGTATCATCGAAGATGCTACTAACCGAAATCGTCTAGCAAAACTACTCAGATTTGAAACTTCCAAGTCTGAGGGTAAACTGACTTCTCTGGATCAGTACATCTCTAGAATGAAATCTGAACAGAAGGATATCTTTTACATAACTGGAACCAGCAAGGAACAATTAGAAAAATCTCCATTCCTTGAGCAACTTAAGAAGAAAAATTATGAGGTTATTTTCTTCACTGATCCAGTTGATGAGTACTTGATGCAATACCTCATGGATTATGAGGACAAAAAGTTCCAAAATGTGTCCAAGGAGGGCCTGAAACTCGGGAAGAGTTCTAAAGACAAGGAACTGAAGGAATCCTTCAAGGATCTTACTAAGTGGTGGAAAAAGTCCCTTGCTGCTAGTGACAATCTTGATGATGTGAAGATATCCAACCGTTTGTATAACACTCCTTGTGTGGTAGTGACGTCAAAATTTGGCTGGAGTGCTAACATGGAGAGGATAATGCAGTCTCAAACTTTATCAAATACTGCCAGCCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCAATCCCAGGCACCCTATTATCAAGGAACTCCGGGATAGAGTAGCTAATAACCCCGAGGATGAGAGGGTGAAGCAAACAGCACAACTGATATACCAGACTGCTCTCTTTGAAAGTGGTTTCCTTCTAAATGACCCTAAGGAATTTGCTTCTCGCATTTATGACTCAGTGAAATCTAGCTTGGACATTAGTCCGGAAGCAACTGTTGAAGGGGAAGATGAAACCGAAGAAGTCGAGTCTGAAGAAAGTGATGCAAAAGAAGCTGCATCTACATCAAAGGTTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGCAGATGTCAAGGACGAGTTGTAG 2505 0.4168 MRKWTLPSAVFLLSLLILISDQGRKIEANAESDSEEVVDLPKVEDKIGAVPSGLSTDSDVVKREAESISKKSLRSNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEILGDGDNAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSSFVEKMQKTGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRIHLRDEAGEYLEEFKLKELVKKYSEFINFPINLWASKEVDVEVPDDEVESSEEEEEESSKASSEEESEDEDAEKKPKTKTVKETTYEWELLNDVKAIWLRSPKDVTDEEYNKFYHSLAKDFSDEKPVTWSHFAAEGDVEFKAVLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLQGLVDSDSLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRRIAEEDPDESNDKDKKEEVSSDNDEKKGQYSKFWNEFGKSIKLGIIEDATNRNRLAKLLRFETSKSEGKLTSLDQYISRMKSEQKDIFYITGTSKEQLEKSPFLEQLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKSSKDKELKESFKDLTKWWKKSLAASDNLDDVKISNRLYNTPCVVVTSKFGWSANMERIMQSQTLSNTASQAYMRGKRVLEINPRHPIIKELRDRVANNPEDERVKQTAQLIYQTALFESGFLLNDPKEFASRIYDSVKSSLDISPEATVEGEDETEEVESEESDAKEAASTSKVEAEAEAEAEAEAEAEAEAEAEAEAADVKDEL 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0059 834 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Lal17g0059 834 MobiDBLite consensus disorder prediction 776 792 - -
Lal17g0059 834 PANTHER BNAA08G14800D PROTEIN 19 802 - -
Lal17g0059 834 SUPERFAMILY Ribosomal protein S5 domain 2-like 344 623 IPR020568 -
Lal17g0059 834 Gene3D - 65 303 IPR036890 -
Lal17g0059 834 MobiDBLite consensus disorder prediction 793 808 - -
Lal17g0059 834 SMART HKATPase_4 100 257 IPR003594 -
Lal17g0059 834 Gene3D - 630 777 IPR037196 -
Lal17g0059 834 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Lal17g0059 834 CDD HATPase_Hsp90-like 87 277 - -
Lal17g0059 834 Hamap Chaperone protein HtpG [htpG]. 75 767 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal17g0059 834 Gene3D - 536 623 - -
Lal17g0059 834 SUPERFAMILY HSP90 C-terminal domain 642 765 IPR037196 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Lal17g0059 834 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
Lal17g0059 834 Gene3D - 343 535 - -
Lal17g0059 834 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 802 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal17g0059 834 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 78 287 IPR036890 -
Lal17g0059 834 MobiDBLite consensus disorder prediction 292 319 - -
Lal17g0059 834 Coils Coil 802 833 - -
Lal17g0059 834 MobiDBLite consensus disorder prediction 771 834 - -
Lal17g0059 834 MobiDBLite consensus disorder prediction 292 329 - -
Lal17g0059 834 PIRSF HSP90_HTPG 53 811 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal17g0059 834 MobiDBLite consensus disorder prediction 809 834 - -
Lal17g0059 834 Pfam Hsp90 protein 259 796 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Lal17g0059 834 MobiDBLite consensus disorder prediction 483 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0059 Lal-Chr17 344333 349545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0059 K09487 - gmx:100779976 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0059 17 344333 349545 Lal17g0059 17 344333 349545 ECH