Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0056 ATGATAAGGGTTAACAGTCGAGCGATATTAGTGGGCAGGGCCTTATTGAACAACTCCACCACCATCTCCGGCGCCGTTTCCGGTGGCGCCACCATTAATCGAGTAATTCCCTTTGCCACATGTTCCACTTCTAACCATCAATCACGGAATCTCGTTGGTCGCTTTGGCCTATCAAATCCTTTTCTCGCTCAGTGCAGTTATGCTGCTGTTGCCACGTCACTCGCTCAAGACATTCAGGCGAAGGGTTTGCCTCATTCAGAAAACGAAGGATTCAACCCCAAAGAGGTGGTTCTCTTTCAGTATGAGGCTTGCCCGTTCTGTAATAAGGTTAAAGCTTTCCTGGACTACTATGATCTTCCATACAGAGTGGTGGAAGTAAATCCGATGAACAAGAAAGAAATCAAATGGTCTGATTACAAGAAGGTCCCAATTTTGACAGTTGATGGTGAACAAATGGTTGATTCTTCAGACATAATTAATAAGTTGGTTATAAAGATACGTCCAGATTATGACCTTAATGCAGATGAAGAGAAGAAGTGGCGGGAGTGGGTGGATAATCACTTGGTCCATGTGTTGTCACCAAACATTTATCGAACGGTTGCTGAGGCTCTAGAGTCATTTGAATACATCACCACTCAAGGCAATTTCAGTTTATATGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAATTGAAGAAGAGACACAATATCACCGATGAGCGTGCAGCATTGTATGGTGCTGCGGAACAATGGGTTGATGCTTTAAACGGCCGGAAATTTCTTGGTGGGTTGAATCCTAATTTAGCAGACCTTGCTGTCTTTGGTGTTCTAAGACCCATCCGCCACCTCAAGTCAGGTAGGGATATGGTAGAGCACACAAGGATTGGGAAATGGTTTTCTGACATGGACTTGGCAGTAGGACAATCTTCCAGGGTCATTGCGAATAATTAG 975 0.4431 MIRVNSRAILVGRALLNNSTTISGAVSGGATINRVIPFATCSTSNHQSRNLVGRFGLSNPFLAQCSYAAVATSLAQDIQAKGLPHSENEGFNPKEVVLFQYEACPFCNKVKAFLDYYDLPYRVVEVNPMNKKEIKWSDYKKVPILTVDGEQMVDSSDIINKLVIKIRPDYDLNADEEKKWREWVDNHLVHVLSPNIYRTVAEALESFEYITTQGNFSLYERLVAKYGGAAAMYFVSKKLKKRHNITDERAALYGAAEQWVDALNGRKFLGGLNPNLADLAVFGVLRPIRHLKSGRDMVEHTRIGKWFSDMDLAVGQSSRVIANN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0056 324 CDD GST_C_mPGES2 170 315 IPR034335 -
Lal17g0056 324 SFLD Prostaglandin E synthase like 65 320 - -
Lal17g0056 324 Gene3D - 172 320 - -
Lal17g0056 324 SFLD Prostaglandin E synthase like.1 65 320 IPR034334 GO:0050220
Lal17g0056 324 ProSiteProfiles Glutaredoxin domain profile. 84 180 - -
Lal17g0056 324 SUPERFAMILY Thioredoxin-like 95 188 IPR036249 -
Lal17g0056 324 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 23 320 - -
Lal17g0056 324 Pfam Glutathione S-transferase, N-terminal domain 98 162 IPR004045 -
Lal17g0056 324 ProSitePatterns Glutaredoxin active site. 98 114 IPR011767 -
Lal17g0056 324 PANTHER GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN 23 320 - -
Lal17g0056 324 Gene3D Glutaredoxin 86 166 - -
Lal17g0056 324 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 94 171 IPR004045 -
Lal17g0056 324 SUPERFAMILY GST C-terminal domain-like 174 314 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0056 Lal-Chr17 326880 329928 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0056 K05309 - gmx:100804696 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0056 17 326880 329928 Lal17g0056 17 326880 329928 ECH