Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0046 ATGGCGCTGAAGTTAGCGGGAGGAGCCGCTTTTGGCTTATCTCTCCTATGTGTTGTTGCTATTTCTCTCTTTCACATTACCTACGCTGAAGATCCCTACAGATTCTTCAACTGGAACGTTACATATGGTGACATTTACCCACTCGGAGTTCGCCAAAGGGGTATACTTATAAATGGGCAGTTCCCAGGTCCAGATATTCATTCAGTTACAAATGACAATCTCATTATCAATGTCTTCAATAGCTTGGATCAGCCTTTTCTTCTTTCATGGAATGGGATCCAACAAAGAAGGAACTCATTCGAAGATGGAGTATCTGGAACAACATGCCCCATCCCACCAGGGAAGAATTTCACATACATTCTTCAAGTGAAGGATCAGATTGGGAGTTTTTACTACTTTCCATCACTTGCATTTCACAAAGCAGCTGGTGGTTTTGGAGGCATTAGGATCCTCAGTAGACCAAGAATTCCAGTACCTTTCCCTGACCCTGCTGGTGATTATACTCTTCTAATTGGAGATTGGTATAAATCCAACCACACTACTTTGAAAGCCCATCTTGACCTGGGCAAGAAGCTGCCCAGCCCAGATGGAGTCCTCATCAATGGTCGTGGACCTAATGGGGTATCTTTCAACGTGGAACAAGGAAAGACTTACAGACTTAGAATATCAAATGTTGGGTTGGAACATTCTCTTAACTTTCGCATCCAGAACCACAAATTGAAGCTAGTAGAAGTAGAAGGAACACACACCCTTCAAACTACCTATTCCTCTCTAGATGTTCATGTGGGACAATCTTATTCAGTTCTAGTAACTGCTGATCAACCTGCTCTGGATTATTACATTGTGGCTTCCACTCGATTCACCTCTAAGGTCATTACCACCACCGGTGTTCTTCGCTATAGCAACTCTGCAGGCCCAGTATCAGGCCCACCTCCTGGTGGACCAACAATCCAAATTGACTGGTCTTTGAACCAGGCCCGATCCATCAGGACTAACCTTACAGCAAGTGGACCAAGACCAAACCCACAAGGATCCTACCATTACGGTCTTATAAACACGACCAAAACTATCGTACTGTCTAGTTCAGCTGGTCAAGTAAGTGGGAAACAAAGATATGCAATTAACAGTGTGTCTTATGTTGCTCCAGACACCCCTCTTAAACTTGCAGATTACTTCAAAATCTCTGATGTCTTCCGTATTGGAAGCATATCAGAGAGACCCACGGGTGGTGGCATTTACATTGACACTTCTGTATTACAAGCTGATTATAGATCCTTTGTTGAGATTGTCTTCCAAAACAATGAAGTCATAGTTCAGAGCTATCATCTTGATGGCTACTCTTTCTTTGTTGTTGGCATGGATGGAGGACAATGGACTCCTGCTAGCAGGAAACAGTACAATCTTCGAGATGCAGTTTCACGGTGCACCACTCAGGTATATCCTAAGTCATGGACTGCTATTTATGTTGCACTTGACAATGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATACCTTGGACAACAGTTTTATTTGCGTGTTTATACAGCATCAACTTCAATCAGAGATGAGTTTCCAATTCCAAAGAATGCACGTCTATGTGGTAAGGCAAGTGGGAGACACACACGACCCCTTTGA 1647 0.4347 MALKLAGGAAFGLSLLCVVAISLFHITYAEDPYRFFNWNVTYGDIYPLGVRQRGILINGQFPGPDIHSVTNDNLIINVFNSLDQPFLLSWNGIQQRRNSFEDGVSGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTLLIGDWYKSNHTTLKAHLDLGKKLPSPDGVLINGRGPNGVSFNVEQGKTYRLRISNVGLEHSLNFRIQNHKLKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPALDYYIVASTRFTSKVITTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIVLSSSAGQVSGKQRYAINSVSYVAPDTPLKLADYFKISDVFRIGSISERPTGGGIYIDTSVLQADYRSFVEIVFQNNEVIVQSYHLDGYSFFVVGMDGGQWTPASRKQYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEFWARQYLGQQFYLRVYTASTSIRDEFPIPKNARLCGKASGRHTRPL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0046 548 PANTHER MULTI-COPPER OXIDASE 11 541 IPR045087 -
Lal17g0046 548 Pfam Multicopper oxidase 40 153 IPR011707 GO:0005507
Lal17g0046 548 Gene3D - 164 313 IPR008972 -
Lal17g0046 548 CDD CuRO_1_AAO_like_1 35 150 IPR034273 GO:0005507
Lal17g0046 548 Gene3D - 349 544 IPR008972 -
Lal17g0046 548 Gene3D - 33 154 IPR008972 -
Lal17g0046 548 Pfam Multicopper oxidase 386 520 IPR011706 GO:0005507|GO:0016491
Lal17g0046 548 SUPERFAMILY Cupredoxins 27 180 IPR008972 -
Lal17g0046 548 CDD CuRO_3_AAO_like_1 382 502 IPR034275 GO:0005507
Lal17g0046 548 Pfam Multicopper oxidase 166 302 IPR001117 -
Lal17g0046 548 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 11 541 - -
Lal17g0046 548 SUPERFAMILY Cupredoxins 350 539 IPR008972 -
Lal17g0046 548 SUPERFAMILY Cupredoxins 160 340 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0046 Lal-Chr17 273559 279498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0046 - - gmx:100815570 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0046 17 273559 279498 Lal17g0046 17 273559 279498 ECH
Lal17g0046 17 273559 279498 Lal4g0056 4 320989 329151 LSH