Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0034 ATGGGTGACGTATCTGATGCAACAACAACAATGAAGAAAAAGAAGAAAGGTCGTCCCTCTCTTTTAGATCTTCATAAACGATCTCTTAAACAACAACACCTCAACGATAATAATTTATACAATTCCCATTCTAACCCTCATCACGATGACGACGATGAGCGCACTCAGAAGAAGCAAAAGCTCTTGATTCGTCTCAATTCTCACAATCTCAACCATTCCCCATTATTCCTAAATCCCGATCTTAACCTCAACGCCCTTAATATTTCCCATCAAACGGATGGAAAGGGTCCGAAAACGACTGATAGTAAACATGATTCACAGGGTGAGTCAGGTCCCACTACACCTTTGCCAGATAAAAAGCTCTTGCTATTTATCCTTGACAGGCTTCAAAAAAAGGACACTCACGGTGTATTCTCTGAGCCCGTGGATCCGGAAGAGCTTCCAGATTATCATGACATCATTAAGCACCCGATGGATTTTGGAACTTTGAGGAACAAGTTGGATGGGGCACTTTATGCCAACTTAGAACAATTTGAGAACGATGTGTTCCTGATATGCTCTAATGCGATGCAATATAATTCTCCTGATACTATTTACCACCGACAGGCCCGGGCCATGCAAGAAGTAGCGAAGAAGGACTTTGAGAATTTGAGGCAAGATAGTGATAGTGATAGTGAACCACAACCCAAACCACAACACAAGATTGTGCAGAGAGGAAGGCCTCCAGGCAAGAACATAAGCAAGTCACTGGATATGTCTCCTTCAGACCGTGTTGCTCCTGAATCTTCCTCTGATGCGACTCTTGCTTCTGGTGGTGATATAGCCAGTGGTTCCAATGGTTATAACCTAAGAAAAGCACTAAGCAGATTTCAGCCTGCAGATTCATCAGCGAGGGCCTCCCACGGCAATTTAAACAGTGGAGGTTATACTAGCTGGTCATATGATTGGGAGAATGAATTTCCAGCTTCTGTTTTAAAAGCTGTGTTAAGGTATGGAAAGAAGCAGTCTGTGGTTGATGAAACCAGGCGTGACACTTACAACCATCCAGTCGCATTAGGAAATGAACCACCATTAGTGGCCACAGTTGAAAATGAATTCAAGCAGCTACTTGCAGTTGGTTTACATGTGAAACATGGCTATGCGAGAAGCCTGGCCCATTTTGCTGCAGATCTTGCTCCGGTTGCTTGGAAGGTTGCTGCAAGGAAAATCAGCAGTGTTTTGCCACCAGGGCATGAATTTGGTCCTGGATGGGTAGCTGAAGATCACATGTCACAGAAGCAACACCTCCCGCCTTGTGATGACGAAAGAAATTCAGACCCTCGTGTACCGGAGGATTATAAAAGCAGACTTCCTTCTCCATCTGGATCATTCCCTGCTGTAAACAGATCATTCTTGCAAAGTGGAAACATGGTAATGAATAGAGAATTGAATTACCAAAATGATTTGAATCTGGTCAAAAATGTTGGTGCTAGTATTGAACCCATGGTTCCTTTGAGGATGCAACAGGAGTCCATGGTGCACTCTGATGATTTTGGTTCAAATTGTCGGCCAGGGTCTAATTTTTCACCTCAAATGAAGATGATAAGACTCTCTGACTTAACTGGATCAACCAGCTCTGGGAATGTTCCTCAATTGTATAACATGGATTCCATAAACAGTCACATGGCGCCTGCAAATATTAATGCACCACTTAGAGGCCAGTTCTTAAACAAGCTAAGTCAACTAGACTCCAGTAATTTATTGGCCCAGGAATCTGGATTTGAGTCACAAAGTGTGTCTCAAGTACTTGCTGGTAAATCATCTCGGCCGGGAATGGAAGTTCCCGCTAAACAGAAATCTTTTTCACTTGCTAATGACTTGAACGGGAACATTGTAGCAACAAATTCAGGCGGTTCTAATGTGGAAACTGGTTCTCAGGTGCAGCCAAATTTGGCATTGCAACTATGA 1947 0.4325 MGDVSDATTTMKKKKKGRPSLLDLHKRSLKQQHLNDNNLYNSHSNPHHDDDDERTQKKQKLLIRLNSHNLNHSPLFLNPDLNLNALNISHQTDGKGPKTTDSKHDSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKHPMDFGTLRNKLDGALYANLEQFENDVFLICSNAMQYNSPDTIYHRQARAMQEVAKKDFENLRQDSDSDSEPQPKPQHKIVQRGRPPGKNISKSLDMSPSDRVAPESSSDATLASGGDIASGSNGYNLRKALSRFQPADSSARASHGNLNSGGYTSWSYDWENEFPASVLKAVLRYGKKQSVVDETRRDTYNHPVALGNEPPLVATVENEFKQLLAVGLHVKHGYARSLAHFAADLAPVAWKVAARKISSVLPPGHEFGPGWVAEDHMSQKQHLPPCDDERNSDPRVPEDYKSRLPSPSGSFPAVNRSFLQSGNMVMNRELNYQNDLNLVKNVGASIEPMVPLRMQQESMVHSDDFGSNCRPGSNFSPQMKMIRLSDLTGSTSSGNVPQLYNMDSINSHMAPANINAPLRGQFLNKLSQLDSSNLLAQESGFESQSVSQVLAGKSSRPGMEVPAKQKSFSLANDLNGNIVATNSGGSNVETGSQVQPNLALQL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0034 648 MobiDBLite consensus disorder prediction 217 275 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 217 233 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 1 57 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 87 117 - -
Lal17g0034 648 SMART bromo_6 111 219 IPR001487 GO:0005515
Lal17g0034 648 SUPERFAMILY Bromodomain 101 222 IPR036427 GO:0005515
Lal17g0034 648 MobiDBLite consensus disorder prediction 8 32 - -
Lal17g0034 648 PANTHER BROMODOMAIN-CONTAINING PROTEIN 9-LIKE 95 648 - -
Lal17g0034 648 PANTHER BROMODOMAIN-CONTAINING PROTEIN 9-LIKE 9 71 - -
Lal17g0034 648 CDD Bromodomain 118 214 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 422 458 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 248 275 - -
Lal17g0034 648 PANTHER BROMODOMAIN CONTAINING PROTEIN 95 648 - -
Lal17g0034 648 PANTHER BROMODOMAIN CONTAINING PROTEIN 9 71 - -
Lal17g0034 648 ProSiteProfiles Bromodomain profile. 130 200 IPR001487 GO:0005515
Lal17g0034 648 MobiDBLite consensus disorder prediction 628 648 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 43 57 - -
Lal17g0034 648 MobiDBLite consensus disorder prediction 426 446 - -
Lal17g0034 648 Pfam Bromodomain 125 204 IPR001487 GO:0005515
Lal17g0034 648 ProSitePatterns Bromodomain signature. 135 192 IPR018359 -
Lal17g0034 648 Gene3D - 116 235 IPR036427 GO:0005515
Lal17g0034 648 PRINTS Bromodomain signature 133 146 IPR001487 GO:0005515
Lal17g0034 648 PRINTS Bromodomain signature 147 163 IPR001487 GO:0005515
Lal17g0034 648 PRINTS Bromodomain signature 163 181 IPR001487 GO:0005515
Lal17g0034 648 PRINTS Bromodomain signature 181 200 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0034 Lal-Chr17 189227 193188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0034 K22184 - gmx:100811115 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0034 17 189227 193188 Lal17g0034 17 189227 193188 ECH