Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0032 ATGTGGATGAATGGTGTTAAAGGGATTGTAGAGAGAGTGATATTGTTGTTGTTAGTGAGAATGAGAAGATTGGATGTATTTGTGTTCGCATTTGCGATTCTTTCATCTCCTGTTCTTTCCGATCTCATCCTCTCCAAAGTTGATCGTCGTATTGATTTGACTACACAAATTGTGCGTGCCACTACTTCACTCAAGGTGGAGAATACGGGATCTGATCTTGTTTCAGAGATTTTGTTGACAATTCCTGATAACCAGGCAAATCACTTGGCGTACTTAAAAGCCACAGTTAATGAAGGAAAGGGAAAAGCGAAAGCATCTTCCAGTGTTAGTTTACCTGTTGAAGTTTACCACCCTAAAGATGCGCCTCCTTCCTTGACATTTTATTCCATATCTTTACCTAAGGGCCTTCGCAAGGGAGATACTTTGAATTTGAATGTCTTCGCGGTTTATACTCATGTATTGGAACCCTTTCCCCTGAAAATTTCTCAAGCTGATATCCAACTTCTATTGTTTCAAGATAGTGCGCATTATCTTTCTCCTTACCCAGTGAAGTCCCAGTCACTCACTGTTAAATTGCCTGATGCAAGAATAGAGTCCTATACAAAGCTAGAAAATTCAAAACTTCAAGGGTCTGAATTGAAATATGGTCCATATGAGAATCTTCCTCCATTCTCATATTTGCCGGCAGTTGTTCACTTTGAGAATAATCAACCCTTTGCCGTTGCTAAAGAGTTGGTGCGGGAGATTGAGATTTCTCATTGGGGCAATGTACAGATCACAGAGCATTACAGCCTTGTTCATGGTGGTGCACAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGGCTAGGCCGTATGTAAGAGGTGCGTCAGCCTTTAGGCGTCTTGTTGCCAAGCTGCCTCCTAGAGCTCATTCTGTGTACTACAGGGATGAAATCGGCAACATTTCTACTTCTAGTTTATGGGGTGATTCGAAAAAGACGGAACTGGAGATTGAACCTAGATACCCAATGTTTGGTGGCTGGAAAACCGAATTTACAATTGGATATGGGTTGCCACTTAAGGACTTTTTATTTGGATTGGATGGAAAGCGCTTCCTTAATATCACTTTTGGTTCACCTATGAATGAGTTGGTGATTGATACTCTCTTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGAGATTTTGGCATCTGTTCCATTTCCTGCAAAACAATGGCAGGAGACGAAGGTTTCTCACTTGGATGTTGCTGGGAGACCTGTTGTTGTGCTGGAGAAGAGCAATGTTGTGCCTGAGCATAATGAGTATTTTCAGGTCTATTATAAATTCTGCAGTCTTTCTATGTTCAGGGAGCCTCTGATGCTGGTTTCTGGCTTTTTCCTTCTCTTTGTTGCCTACATTATCTACATGCGGGCAGATTTGTCCATCTCCAAGTCTTCTGCATCTTATTTGGCAAAACTCCAGTGGGAAGAGGTACAAGCAACTGTTCAGCAGCTCCATAAAATCATTAGTCGTTGCTTGACAGCACATGACAAGCTCGAAGCATCATTGCCTGATCTTTCCAGAACTGGAGATGTTCAAGCTTCTAAAGCAACTCGAAAATCAGTTGATAGCTTGTTGAAAGAGCTTTCCAAAGAGTTGAAGCCTCTAGTGGCATTCTTGCAGTCTTCTCCACAAGCCTCTCAAATATTTCCCAAGGTTGAGGAACTGGTTGCTAAGGAGAGAGACTTTCAGGAGAGACTTATGGCAAAACACACAACAGTTGTAGACTGCTATGAAAAAAAATTGGGAGGAAGGGAAATTGAGAATCGTATTGCTTCGCATCAGCAGAAAATTACAGCTTTGAGACAGGAGATTGATGATCTTATGGACTTCATTGATGAGATATGA 1893 0.4163 MWMNGVKGIVERVILLLLVRMRRLDVFVFAFAILSSPVLSDLILSKVDRRIDLTTQIVRATTSLKVENTGSDLVSEILLTIPDNQANHLAYLKATVNEGKGKAKASSSVSLPVEVYHPKDAPPSLTFYSISLPKGLRKGDTLNLNVFAVYTHVLEPFPLKISQADIQLLLFQDSAHYLSPYPVKSQSLTVKLPDARIESYTKLENSKLQGSELKYGPYENLPPFSYLPAVVHFENNQPFAVAKELVREIEISHWGNVQITEHYSLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPMFGGWKTEFTIGYGLPLKDFLFGLDGKRFLNITFGSPMNELVIDTLFVKVVLPEGSKEILASVPFPAKQWQETKVSHLDVAGRPVVVLEKSNVVPEHNEYFQVYYKFCSLSMFREPLMLVSGFFLLFVAYIIYMRADLSISKSSASYLAKLQWEEVQATVQQLHKIISRCLTAHDKLEASLPDLSRTGDVQASKATRKSVDSLLKELSKELKPLVAFLQSSPQASQIFPKVEELVAKERDFQERLMAKHTTVVDCYEKKLGGREIENRIASHQQKITALRQEIDDLMDFIDEI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0032 630 PANTHER RIBOPHORIN I 26 608 IPR007676 GO:0006486|GO:0016021
Lal17g0032 630 Coils Coil 599 619 - -
Lal17g0032 630 Pfam Ribophorin I 44 470 IPR007676 GO:0006486|GO:0016021
Lal17g0032 630 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 26 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0032 Lal-Chr17 181000 184830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0032 36 568 Miscellaneous Gene Families AT1G76400 66.604 0.0 735
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0032 K12666 - gmx:100817203 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0032 17 181000 184830 Lal17g0032 17 181000 184830 ECH