Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0015 ATGAGAGTTCATAATGTAGTGCTGGTTGTAACTCTTGTTCTTTGTATTGTTACCATTGCTGGTGCACAAGGGCGTGAACCTGCTGTGAGGCTTCATAAGGCTCATTCTGTGAGTGGTGTTCAGAATGTGAGTTATGATGGTAGGTCTCTCTTGATCAACAATCAACGCCACCTTCTCTTTTCTGGTTCCATTCATTACACTAGAAGCACCCCTGAGATGTGGCCTGACCTTCTTGATAAGGCAAGACATGGTGGTTTGAATGTCATTCAAACTTATGTCTTTTGGAATGCTCATGAGCCTGAGAAAGGCAAGTGGAACTTCCAAGGCAACTATGATCTTGTTAAGTTCATTAAGCTCATTCAAGAGAAAGGAATGTTTGCAACTCTCAGAGTTGGCCCTTTCATCCAAGCTGAATGGAATCACGGAGGACTTCCATATTGGCTAAGAGAGGTTCCTGGCATCATATTCCGCTCTAACAATGAGCCCTTTAAGCAACACATGGAAGCATACGTGACAAAGATCATAAAAATGATGAAAGATGAGAAGCTGTTTGCATCCCAAGGAGGGCCAATAATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACTTGCTTATGACGAAGATGGTCCCAGTTATGTCCAATGGGCTGCAAATATGGCAGTGGCACAAAACATTGGAGTTCCATGGATCATGTGCAAACAGAAGGATGCCCCTGATCCAGTTATCAATGCATGCAATGGAAGGCACTGTGGTGATACTTTCACTGGCCCAAACAAACCATACAAGCCTGCCCTATGGACTGAGAACTGGACAGCTCAATACAGAGTTTTTGGTGATCCAACTTCCCAAAGATCTGCTGAAGATATTGCCTTCTCAATTGCCCGCTTCTTCTCCAAGGATGGCATCTTGGTTAACTACTATATGTACCATGGTGGAACAAACTTTGGAAGGACAAGCGCTGCATTCACCACAACCCGGTACTACGATGAAGCACCACTTGATGAATTTGGCCTTCAAAGAGAGCCAAAATGGAGTCACTTGAGGGATGCACACAAGTCTTTGAACCTATGCAAGAAGGCTCTACTCACTGGAAAAGCCACTGTACAAAGGCTGAACGAGTTTCATGAGATTAGAGTGTATGAGAAACCCCAAAATGACATTTGTTCAGCATTCATCACTAACAACCACACAAATGAAGCAGCCACCATTAACTTCAGGGGTAAAAACTTCTTTCTGCCACCACATTCCATTAGTGTCCTCCCTGATTGTAAGACTGTGGTCTTCAACACTCAACAGATAGCTTCACAACACAATGCAAGGAACTTCAGGAGGTCAACTCTTGCAAACAATCACAAATGGGAGGTGTTTTCTGAGACCATCCCATCACTACCAGTCACCCAAAAACTCCCTGCTGAGCTTTATAGCTTGCTTAAAGACACCACAGATTATGCATGGTTCAGCACCAGCTTCAACTTGGGTGCTCAAGACTTGCCAAAGAACGGAGCAGCACCAGTTCTTCGTATTATGAGTCTTGGACATTCATTGCTTACATTTGTAAATGAAGAATATATTGGATCTAATCATGGAACACATGAAGAGAAATCATTTGAATTCCAGAAACCTGTCAACTTCAAGGTTGGGAACAACCGTATTACAATTTTGGCTAGCACAGTTGGACTACCAGACAGTGGAGCATACATGGAACACAGGTACGCAGGACCCAAGTCCATAAGCATCCTTGGTCTCACTACAGGAACAATTGAACTCACTGCCAATGGTTGGGGTCACAAGGTTGGTCTGAAAGGTGAAAAGCAAAAAATCTTCAGTGAGGAGGGATCAAAGAGAGTAAAGTGGAGAGCTGCTGTTGGAAATGCACCAGCTTTGTCATGGTTCAAGACAAGATTTAGCACCCCAGAGGGAAGGGATCCTGTTGCCATAAGGATGAATGGAATGGGGAAGGGAATGATATGGGTGAATGGGAAAAGCATTGGTCGTCACTGGATGAATTTCCTGTCCCCTATTGGAAAGCCTACTCAGTCAGAATACCACATCCCAAGAGCATACCTCAAACCAAAAGAAGAAAACTTGCTAGTTGTATTGGAAGAGGAGATTGCAAATCCAGGACAGGTTGAGATTGTAACTGTTGATAGAGATGTTGTATGCAGCTTCATAACAGAGAACCATCCAGCAAATGTGAATTCATTTGCATCAAAGGACATGAAATTCCATTCAGTTATAGAAACTGTGAAACCAGCTGCAGTACTAAAGTGTTCAAACTTCAAGAAGGTTGTGGCAGTTGAGTTTGCAAGCTATGGAAATCCATCTGGTTTCTGTGGAAGCTTTGGTTTAGGGAACTGCAACGTGGAAGGTGCAAATAAAATAGTGGAGGAAGAATGCTTAGGAAAGAAATCATGCAGGGTATCAATGGAAAGGTTTAGCAAGAATGGGAATGTATGCCAAGGTGTGGAGAAGACACTAGCAATACAACTGAGGTGTTCTCATTAG 2511 0.4325 MRVHNVVLVVTLVLCIVTIAGAQGREPAVRLHKAHSVSGVQNVSYDGRSLLINNQRHLLFSGSIHYTRSTPEMWPDLLDKARHGGLNVIQTYVFWNAHEPEKGKWNFQGNYDLVKFIKLIQEKGMFATLRVGPFIQAEWNHGGLPYWLREVPGIIFRSNNEPFKQHMEAYVTKIIKMMKDEKLFASQGGPIILAQIENEYNHIQLAYDEDGPSYVQWAANMAVAQNIGVPWIMCKQKDAPDPVINACNGRHCGDTFTGPNKPYKPALWTENWTAQYRVFGDPTSQRSAEDIAFSIARFFSKDGILVNYYMYHGGTNFGRTSAAFTTTRYYDEAPLDEFGLQREPKWSHLRDAHKSLNLCKKALLTGKATVQRLNEFHEIRVYEKPQNDICSAFITNNHTNEAATINFRGKNFFLPPHSISVLPDCKTVVFNTQQIASQHNARNFRRSTLANNHKWEVFSETIPSLPVTQKLPAELYSLLKDTTDYAWFSTSFNLGAQDLPKNGAAPVLRIMSLGHSLLTFVNEEYIGSNHGTHEEKSFEFQKPVNFKVGNNRITILASTVGLPDSGAYMEHRYAGPKSISILGLTTGTIELTANGWGHKVGLKGEKQKIFSEEGSKRVKWRAAVGNAPALSWFKTRFSTPEGRDPVAIRMNGMGKGMIWVNGKSIGRHWMNFLSPIGKPTQSEYHIPRAYLKPKEENLLVVLEEEIANPGQVEIVTVDRDVVCSFITENHPANVNSFASKDMKFHSVIETVKPAAVLKCSNFKKVVAVEFASYGNPSGFCGSFGLGNCNVEGANKIVEEECLGKKSCRVSMERFSKNGNVCQGVEKTLAIQLRCSH 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0015 836 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 32 831 - -
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 53 70 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 74 92 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 129 148 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 186 201 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 267 282 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 304 319 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 323 339 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 628 642 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 PRINTS Glycosyl hydrolase family 35 signature 655 671 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 Gene3D Glycosidases 40 359 - -
Lal17g0015 836 Gene3D - 599 726 - -
Lal17g0015 836 Gene3D - 743 836 IPR043159 -
Lal17g0015 836 SUPERFAMILY (Trans)glycosidases 42 359 IPR017853 -
Lal17g0015 836 Pfam Glycosyl hydrolases family 35 49 355 IPR031330 -
Lal17g0015 836 SUPERFAMILY Galactose-binding domain-like 593 740 IPR008979 -
Lal17g0015 836 Pfam Beta-sandwich domain in beta galactosidase 363 435 IPR041392 -
Lal17g0015 836 Pfam Galactose binding lectin domain 757 834 IPR000922 GO:0030246
Lal17g0015 836 PANTHER BETA-GALACTOSIDASE RELATED 32 831 IPR001944 GO:0004553|GO:0005975
Lal17g0015 836 Pfam Beta-galactosidase jelly roll domain 624 702 IPR025300 -
Lal17g0015 836 SUPERFAMILY Galactose-binding domain-like 419 575 IPR008979 -
Lal17g0015 836 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 188 200 IPR019801 GO:0004553|GO:0005975
Lal17g0015 836 ProSiteProfiles SUEL-type lectin domain profile. 749 835 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0015 Lal-Chr17 68325 71814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0015 43 834 Glycoside Hydrolase AT2G16730 59.125 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0015 - - gmx:100791456 1214.91