Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0008 ATGGGGCTGATGAGTGCCACTACTCTTTATGCTCTATCTAGTGCTACACCTACTCTTCTTAGTAATCGGAATCTGTCATCATTGAGGTGCAGATCCCAGGTTGGGAGTCCTGTTAGAGGAACAAGCATACTAGTGGTTGGTGGGACAGGTACCCTTGGAAGACAGATTGTGAGGCGTGGCCTTGACGAAGGGTACGATGTGCGGTGCCTGGTCAGGCCTCGACCTGCTCCGGCTGATTTCCTTCGTGACTGGGGTGCCACTGTGGTCAACGCTGACCTCACCAAGCCTGAATCAATCCCTGCTACTTTGGTTGGGATTCACACTATCATTGATTGTGCCACTGGTCGCCCTGAAGAGCCCATCAACACCGTTGATTGGCAAGGTAAAGTTGCTCTCATTCAATGTGCCAAAGCTATGGGTATTCAGAAATATGTCTTCTATTCTATCCATAACTGTGACAAACATCCTGACGTTCCTCTCATGGAGATCAAGTATTGTACTGAGAAATTTCTCCTCGATTCTGGAATTAATCATTTCGTCATTCGCTTATGTGGTTTCATGCAAGGCCTTATTGGTCAGTATGCGGTTCCTATCCTGGAAGAGAAATCAGTTTGGGGAACAGATGCCCCAACCCGAATTGCTTACATGGATACTCAAGATATAGCTCGATTGACATTCATAGCGTTAAGAAATGAGAATATAATAAATGGAAAAGTGCTTACATTTGCTGGGCCTCGTGCTTGGACAACCCAAGAGGTTATCACATTGTGTGAGAGACTTGCAGGCCAAGATGCTAATGTCACCACTGTTCCTGTCTCCATTCTAAGACTCACCCGTCAGTTGACTCGCTTTTTTGAATGGACTAATGATGTTGCTGATCGTTTGGCTTTTTCTGAGGTCCTTACCAGCGACACTGTTTTTTCTGTTCCCATGGCAGAGACATATAATCTTCTCGACTGCAATATTGATCCTCTAATTGATCTTCAAGTATCATCTCAGGGTGGTGAGAAATCCAAGAAGAAGGTTGTCATTGATGAGAATGTGATCGAGGTACTAGAAAAGATGCCCACTGTTGTTTTTGCTGGGAAGAAAAAGGGTAAATCGAAAAGGGGTGGCAGGAGAAGTTTATTTGGTGCATCGAGTTTAGATTTGCTTGGTAAAGAAGGTGGTGGAGCTGGTATTGGTGAGATTGATGATAGGCAGTATTCAGAGAAGAAGGAGAAGGAAGATGTTGATGATGAAGACATAAGGACCAATAACCTTCTCAGTAAAGAAGAACTCTCTAAGAAGAAAAGCAGTGGTGATACTGCAAAAGTGAGAGATGAAATTGGTGTAGGGAGCTGCTGGGGAGAACAATGTGGGAGACAAGCAGGGGGAGCTGTATGCCCAGGTGGATTATGTTGCAGCCAGTTTGGATGGTGTGGGTCAGCCATTGAATACTGTGGAACTGGTTGCCAAAGCCAATGTGGTGGAAGTAGTGGTGGTGGTGGTGGTGATATTGGTAGTATCATCTCCCGGGACAACTTCAACCAGATACTTAAACACCGTGATGATGCTGCCTGCCCAGCCAAAGGGTTCTATACTTATGATGCTTTCATTTCTGCTGCCAAGTCTTTCCCCAACTTTGCTTCCACTGGGGATACTACCACTCGCAAAAGGGAGATTGCAGCTTTCTTAGCCCAAACTTCCCATGAAACTACTGGGGGGTGGCCAAGTGCACCAGATGGCCCATATTCTTGGGGATACTGCTTTGTTAGGGAACAAAACCCAAGTAACTATTGTGAGTCAAGCACTCAATATCCTTGTGCTCCTGGCAAGCAATACTATGGTCGGGGTCCTATTCAAATCTCTTGGAACTACAACTATGGACAATGTGGAAAAGCAATAGGTGTGGACTTGTTGAACAACCCAGACCTTGTGGCGAGTGACCCACTGATCTCATTCAAGACAGCAATATGGTTCTGGATGACACCGCAGTCACCAAAGCCATCATGCCACAATGTCATCACCGGAGGATGGAACCCATCAGACAGTGATAGGGCAGCAGGGCGGCTTCCTGGATACGGCACTGTCACCAATATCATCAATGGTGGCCTTGAATGCGGCATTGGGCAGGATAGCAGGGTGCAGGATCGTATCGGATTTTACAAGAGATATTGTGACTTGCTTGGCATTCCCTATGGCAGTAACCTTGACTGTTCTTCCCAGAGGCCATTTGGCTCTGCACTGGACACAATGTAG 2241 0.4636 MGLMSATTLYALSSATPTLLSNRNLSSLRCRSQVGSPVRGTSILVVGGTGTLGRQIVRRGLDEGYDVRCLVRPRPAPADFLRDWGATVVNADLTKPESIPATLVGIHTIIDCATGRPEEPINTVDWQGKVALIQCAKAMGIQKYVFYSIHNCDKHPDVPLMEIKYCTEKFLLDSGINHFVIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIALRNENIINGKVLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSILRLTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMAETYNLLDCNIDPLIDLQVSSQGGEKSKKKVVIDENVIEVLEKMPTVVFAGKKKGKSKRGGRRSLFGASSLDLLGKEGGGAGIGEIDDRQYSEKKEKEDVDDEDIRTNNLLSKEELSKKKSSGDTAKVRDEIGVGSCWGEQCGRQAGGAVCPGGLCCSQFGWCGSAIEYCGTGCQSQCGGSSGGGGGDIGSIISRDNFNQILKHRDDAACPAKGFYTYDAFISAAKSFPNFASTGDTTTRKREIAAFLAQTSHETTGGWPSAPDGPYSWGYCFVREQNPSNYCESSTQYPCAPGKQYYGRGPIQISWNYNYGQCGKAIGVDLLNNPDLVASDPLISFKTAIWFWMTPQSPKPSCHNVITGGWNPSDSDRAAGRLPGYGTVTNIINGGLECGIGQDSRVQDRIGFYKRYCDLLGIPYGSNLDCSSQRPFGSALDTM 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0008 746 Gene3D - 42 304 - -
Lal17g0008 746 MobiDBLite consensus disorder prediction 398 419 - -
Lal17g0008 746 PANTHER - 28 328 IPR044256 -
Lal17g0008 746 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 291 IPR036291 -
Lal17g0008 746 PRINTS Chitin-binding domain signature 460 468 IPR001002 GO:0008061
Lal17g0008 746 PRINTS Chitin-binding domain signature 468 475 IPR001002 GO:0008061
Lal17g0008 746 PRINTS Chitin-binding domain signature 475 482 IPR001002 GO:0008061
Lal17g0008 746 Gene3D - 503 734 - -
Lal17g0008 746 SUPERFAMILY Plant lectins/antimicrobial peptides 452 492 IPR036861 GO:0008061
Lal17g0008 746 CDD ChtBD1_GH19_hevein 451 482 - -
Lal17g0008 746 Gene3D Endochitinase, domain 2 586 642 - -
Lal17g0008 746 Gene3D - 450 492 IPR036861 GO:0008061
Lal17g0008 746 Pfam NmrA-like family 43 265 IPR008030 -
Lal17g0008 746 ProSiteProfiles Chitin-binding type-1 domain profile. 450 491 IPR001002 GO:0008061
Lal17g0008 746 ProSitePatterns Chitinases family 19 signature 1. 521 543 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lal17g0008 746 Pfam Chitinase class I 503 733 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lal17g0008 746 Pfam Chitin recognition protein 452 489 IPR001002 GO:0008061
Lal17g0008 746 CDD SDR_a5 43 246 - -
Lal17g0008 746 SUPERFAMILY Lysozyme-like 499 740 IPR023346 -
Lal17g0008 746 CDD chitinase_GH19 506 733 - -
Lal17g0008 746 ProSitePatterns Chitin recognition or binding domain signature. 462 481 IPR018371 GO:0008061
Lal17g0008 746 ProSitePatterns Chitinases family 19 signature 2. 646 656 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lal17g0008 746 MobiDBLite consensus disorder prediction 394 419 - -
Lal17g0008 746 SMART ChitinBD_3 452 489 IPR001002 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0008 Lal-Chr17 37957 43044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0008 451 743 Glycoside Hydrolase AT3G12500 70.370 2.36e-152 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0008 - - lang:109328409 590.497