Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0004 ATGGTGAAAGTAGCATTTTGTGATTTTCGGTTCCTTCTGTTGATTGCAGCAGCCGTCTTCATCTACATCCAGATGAGGCTGTTCGCAACTCAATCACAATATGCTGATCGTCTTGCCGCTGCTATTGAAGCTGAAAACCATTGTACAAGTCAAATGCGTTCTCTCATCGATCAGATTAGCTTACAACAAGGACGTATTGTCTCTCTCGAAGAAGAGACTACCCGCCGTGACCAAGAATTTCGACAAATCAAGTCTCTCCTTCAACATCATCGAAGAAAAGACCTACAGAGGCTGATGGACAATGTGCAGGTTCCAGTTGCAGCTGTTGTCATCATGGCATGTAATCGCGCTGATTACCTTGAGAGGACTATTAATTCTGTATTGAAATTCCAAAGGCCCATTTCTTCACGGTTTCCTCTATTTGTATCTCAGGATGGATCAAATCCAGATGTTAAAAGCAAGGCATTGAGCTATGACCAATTATCTTATATCCAGCACTTGGATTTAAAACCAGTTGAAACTGAAAGGCCAGGGGAATTAATTGCTTACTACAAGATTGCAAGTCATTATAAGTGGGCTCTAGATCAACTATTCTACAAGTATAACTTCACCCGAGTAATCATCCTTGAAGATGACATGGAAATAGCACCTGATTTTTTCGACTATTTTGAAGCTACATCAGCTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCCTCATGGAATGACAATGGACAAAAGCAGTTTGTGCACGATCCATATGAACTTCATCGCTCAGACTTCTTTCCTGGACTAGGATGGATGCTGGCTAGACCTACATGGGATGAACTATTAAAAGAGAATCACAAAGGACGGCAGTTTATCCGTCCAGAAGTATGCAGAACATATAATTTCGGTGAGCATGGTTCTAGCCTGGGACAGTTTTTTAAGCAATATCTTGAGCCAATTAAGTTGAACGAGGTCCAGGTTGATTGGAAGTCCTTGGACTTGAGCTATTTGCTGGAGGACAAATATACCATGCACTTTGCCAACATTGTTCACAAAGCTAAACCTGTTTATGGAGCGGACATGGTTCTAAAGGCATATAATATAGATGGTGATGTGCGTATTAAGTACAAAGATCAGTCAGATTTTGAAAACATTGCTCGCCAATTTGGCATATTTGAAGAGTGGAAGGATGGTGTGCCCAGGACAGCCTATAAAGGTGTAGTTGTTTTCAGATATCAAACAAAGCGTATTTTCCTTGTTGGTTCAGAATCTTTGAAGCAGCTTCAGATTAAAGATTTTTAA 1293 0.4068 MVKVAFCDFRFLLLIAAAVFIYIQMRLFATQSQYADRLAAAIEAENHCTSQMRSLIDQISLQQGRIVSLEEETTRRDQEFRQIKSLLQHHRRKDLQRLMDNVQVPVAAVVIMACNRADYLERTINSVLKFQRPISSRFPLFVSQDGSNPDVKSKALSYDQLSYIQHLDLKPVETERPGELIAYYKIASHYKWALDQLFYKYNFTRVIILEDDMEIAPDFFDYFEATSALLDKDKSIMAVSSWNDNGQKQFVHDPYELHRSDFFPGLGWMLARPTWDELLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNEVQVDWKSLDLSYLLEDKYTMHFANIVHKAKPVYGADMVLKAYNIDGDVRIKYKDQSDFENIARQFGIFEEWKDGVPRTAYKGVVVFRYQTKRIFLVGSESLKQLQIKDF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0004 430 Pfam GNT-I family 16 428 IPR004139 GO:0006486|GO:0008375
Lal17g0004 430 Gene3D - 353 428 - -
Lal17g0004 430 Coils Coil 52 72 - -
Lal17g0004 430 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 105 314 IPR029044 -
Lal17g0004 430 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 427 IPR029044 -
Lal17g0004 430 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 8 428 - -
Lal17g0004 430 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 8 428 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal17g0004 7 429 Glycosyltransferase AT4G38240 71.429 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0004 K00726 - gmx:100795005 757.673