Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1843 ATGGAGCAAATAGGCATAATAAGTGAAGTAAATCATCAAAGAATAAAAAGCAATGGGATATGGATTCACATAGCTGAAGAAGGGACAGGGCCAATGGTTCTATTGCTTCATGGGTTCCCTGAAATATGGTATTCTTGGCGCCATCAGATTAAATATTTGGCCAAAAATGGTTATCATGTTGTTGCACCTGATCTTAGAGGATATGGTGATTCTGATGCTCCTCTAAGTCCAGATTCATATACTTGTCACCATCTTGTAGGTGATCTTATAGGTTTGCTTGATCATTTTGGTGAGCAACAGGCATTGGTAGTTGGATGTGATTGGGGTGCAACAATTGGATGGTATCTTAGTCTCTTAAGGCATGATAGAGTGAAAGGATTTGTTGCTCTAGGTGTTCCTTACTATCCAAGATCTTCAACTATAAAACCTCTACAAGCTATCAAAAAACTATATGGAGATCATACTCATGTCTCCCAATTCCAGAATCCTGGTAGAGCAGAAAGATCATTTGCAAGATATGATTGTATGACAGTGATGAAGAAGTTTATGTTAACAAGTTGGCCACATTTTCTAGTTGCTCCTCATGGAATGGAGATTATTGATTTCTTGCCAACTCCATCAGTTATACCATCATGGATAACTGAAGAAGAACTCATGTTCTTTTCAGACAAATTCCAAGAGTCTGGTTTCACTGGTGCATTCAATTATTACCGTGCAATGGACTTAAATTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGATTACAGTCCCAACAAAGTTGATTATTGGAGACAAAGACTTTGGGTTTGAAAGTGGTGGTGTGAGGGAATTTGTGGAAGGAGATTTGTTAAAAAGCCTTGTTCCCAATCTTGATGTTGTTATCATAGATGGTCACCATTTTATACATCAAGAGAGAGCTCAACAAGTTTCTGATGAAATCCTTTCCTTCATTCATAAATTGTCTTTTTGA 972 0.3796 MEQIGIISEVNHQRIKSNGIWIHIAEEGTGPMVLLLHGFPEIWYSWRHQIKYLAKNGYHVVAPDLRGYGDSDAPLSPDSYTCHHLVGDLIGLLDHFGEQQALVVGCDWGATIGWYLSLLRHDRVKGFVALGVPYYPRSSTIKPLQAIKKLYGDHTHVSQFQNPGRAERSFARYDCMTVMKKFMLTSWPHFLVAPHGMEIIDFLPTPSVIPSWITEEELMFFSDKFQESGFTGAFNYYRAMDLNWELLAPWQGSKITVPTKLIIGDKDFGFESGGVREFVEGDLLKSLVPNLDVVIIDGHHFIHQERAQQVSDEILSFIHKLSF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1843 323 Gene3D alpha/beta hydrolase 7 322 IPR029058 -
Lal16g1843 323 PANTHER EPOXIDE HYDROLASE 2 321 - -
Lal16g1843 323 PRINTS Epoxide hydrolase signature 37 55 IPR000639 GO:0003824
Lal16g1843 323 PRINTS Epoxide hydrolase signature 57 72 IPR000639 GO:0003824
Lal16g1843 323 PRINTS Epoxide hydrolase signature 103 116 IPR000639 GO:0003824
Lal16g1843 323 PRINTS Epoxide hydrolase signature 117 130 IPR000639 GO:0003824
Lal16g1843 323 PRINTS Epoxide hydrolase signature 257 273 IPR000639 GO:0003824
Lal16g1843 323 PRINTS Epoxide hydrolase signature 295 317 IPR000639 GO:0003824
Lal16g1843 323 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 2 321 - -
Lal16g1843 323 Pfam alpha/beta hydrolase fold 31 305 IPR000073 -
Lal16g1843 323 SUPERFAMILY alpha/beta-Hydrolases 7 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1843 Lal-Chr16 17494824 17498271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1843 6 322 Acyl Lipid Metabolism Gene Families AT3G51000 60.748 7.50e-146 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1843 - - gmx:100818894 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1843 16 17494824 17498271 Lal16g1843 16 17494824 17498271 ECH