Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1832 ATGGAAGAGAAAGAGGAGAAAGGGAGAATGAAGATAGTAACTTACAACGTTAACGGTCTTCGACAACGCATAGTGCAGTTCGGTTCACTTCGGAATCTGCTTAATTCTTTCGACGCAGACATAATTTGCTTTCAGGAAACAAAACTAAGGAGACAAGAAGTAACAGCGGATTTGGTAATGGCTGAGGGATATGAATCATTCTTTTCTTCAACTCGTACAACTCAGAAAGGCCGAACCGGATATTCTGGTGTTATTACATTTTGTCGCGTAAAGTCAGCATTTTCAAGTAACGAAGTGGCCTTGCCCCTGTCTGCAGAGGAAGGCTTCACTGGTCTTGTGGGAAACTCTCAAACCAGCAAAAAAGAATTGTCTTTCTTATCAGAAGGTGTTGAGGAGTTTTCTAAAGATGAGCTTCTAAGTGTTGATAGTGAGGGGCGATGCGTTATCACAGATCATAGTCACTTCGTTCTTTTCAATGTGTACGGGCCTCGAGCTGTAAGTGATGACACAGAAAGGATTAAGTTTAAGCAAATGTTTTACAGAATACTACAGAGAAGATGGGAGTCTCTCCTTCGTGAGGGAAGGAGAATACTCGTTGTTGGTGATCTTAATATTGCACCATCTGCTGTCGACCGATGTGATGCAGGACCTGATTTTGATAATAATGAGTTTAGAAGATGGTTCAAATCAATGTTACTTGAAAATGGAGGTCAATTTTGTGATGTCTTCAGAGCAAAGCATCCAGATAAGTATGATGCTTTCTGGACATCTGATTACTGTGTCCTTCAGTTATGTGTTTCAATGAATTCATATATAGTAATCTTGATACCTGACAGCATTACCTTCTCAAAAAGTGGAATGGAAGCATACACCTGTTGGGCACAAAATACAGGTGCTGAAGTATTTAACTTTGGGAGTAGAATTGACCACATTCTATTTGCTGGTTCATGCCTACACGAATCAAATGACCCACAATGCCATAGTTTCTTAAGTTGCCATGTCAAGGAATGTGACATTATGACACACTATAAACGGTGTAAACCTGAAAGCACACAGAGTGCCCAGAGGTGGAAAGGAGGTCGCAGCATTAAACTGGAAGGATCGGATCATGCTCCAGTTTTTATGGCTTTAAATGAAATTCACGAGGTCTCTCTGCATAGTACACCCCCCTTATCTGCTAGATATGTCCCTATGGTTCATGGCTTACAGCAAACTCTAGTGTCAGTTTTGATGAAAAGACAAGTTTCTGAAGAAATGAAATCTTGCAAAATGTCACATAAGGACATTGCAATGGGGAGTATTTGTGAGAGTGTAGAACCAGTTTCTGTCATATCTCCTAGTGATTGTTATTTTCCTCCAAGGCAGGACTCTGAAGATAGCATTTTAGAATCAAATGAACTTTCGGGAGGTTCTTCTCAGGAAGCTATTTCTTTATCAGGAAAAGAATATGAAAAATCAATATCCATGCAAAATAAAACCAAGAAAAAAGCTAGAAACAGTCAATATTCCCAGCCCTCCCTTATGTCTTTTTTCCAGAGAAGTACAAATGTTGACAATGGTGTCAATGAATCCTGTATCGATGATTCAAATATTCAGGCAGAATCCTCACAACCTGGCCCTAACATACATGAAACTCCTACAGTATTTTATCATAGTGGCAGCCCCAAGCCAGAAACAGATGAATGTGATCAGGATTTGGCTAAATTAGATGATAATTCTACAAAAAAAGAAAGGAACAATGTTGCTTCATTGGATTGGCAAAGAATACAGCAAATGATGCAGAACAGTATACCTCTATGCAAGGGCCATAAGGAACCTTGTATCGCTCGTGTGGTGAGGAAACGAGGACCTAATTTTGGTCGCAGGTTCTATGTTTGTGCACGTGCTGAGGGGCCTGCGTCTAATCCTGAAGCAAACTGTGGTTACTTTAAATGGGCTGCTTCAAAATCTAGGAATAAATAA 1962 0.4006 MEEKEEKGRMKIVTYNVNGLRQRIVQFGSLRNLLNSFDADIICFQETKLRRQEVTADLVMAEGYESFFSSTRTTQKGRTGYSGVITFCRVKSAFSSNEVALPLSAEEGFTGLVGNSQTSKKELSFLSEGVEEFSKDELLSVDSEGRCVITDHSHFVLFNVYGPRAVSDDTERIKFKQMFYRILQRRWESLLREGRRILVVGDLNIAPSAVDRCDAGPDFDNNEFRRWFKSMLLENGGQFCDVFRAKHPDKYDAFWTSDYCVLQLCVSMNSYIVILIPDSITFSKSGMEAYTCWAQNTGAEVFNFGSRIDHILFAGSCLHESNDPQCHSFLSCHVKECDIMTHYKRCKPESTQSAQRWKGGRSIKLEGSDHAPVFMALNEIHEVSLHSTPPLSARYVPMVHGLQQTLVSVLMKRQVSEEMKSCKMSHKDIAMGSICESVEPVSVISPSDCYFPPRQDSEDSILESNELSGGSSQEAISLSGKEYEKSISMQNKTKKKARNSQYSQPSLMSFFQRSTNVDNGVNESCIDDSNIQAESSQPGPNIHETPTVFYHSGSPKPETDECDQDLAKLDDNSTKKERNNVASLDWQRIQQMMQNSIPLCKGHKEPCIARVVRKRGPNFGRRFYVCARAEGPASNPEANCGYFKWAASKSRNK 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1832 653 MobiDBLite consensus disorder prediction 530 563 - -
Lal16g1832 653 PANTHER AP ENDONUCLEASE 10 643 IPR004808 GO:0004518|GO:0006281
Lal16g1832 653 Pfam Endonuclease/Exonuclease/phosphatase family 13 315 IPR005135 GO:0003824
Lal16g1832 653 SUPERFAMILY DNase I-like 10 377 IPR036691 -
Lal16g1832 653 Pfam GRF zinc finger 598 647 IPR010666 GO:0008270
Lal16g1832 653 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2 10 643 - -
Lal16g1832 653 MobiDBLite consensus disorder prediction 486 505 - -
Lal16g1832 653 Gene3D Endonuclease/exonuclease/phosphatase 1 379 IPR036691 -
Lal16g1832 653 ProSiteProfiles AP endonucleases family 1 profile. 10 379 IPR004808 GO:0004518|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1832 K10772 - gmx:100781120 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1832 16 17435363 17444898 Lal16g1832 16 17435363 17444898 ECH