Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1782 ATGAAATTCAAGAGGAAACTTGCATCGGCCGGTCGAAACGACGACCGGACCAACCCCTTAATCTGGCTAGCCGCGGTTGTTTGCACCATAATAGCGATAGCGGTAACGATTTCAGTCATCCACCCTAGAGTACCTACCATTAGTATCACCAATGCACACCTTGACCTTCTAAAAAATGACTATGCTGGTCTTCTCCAAACACAAATTTCAATTGTTATGAGAGCACAAAATGGTAATGCTAAGGCACATGCAACATTTTCTAATATAAGGTTCAATATTAGTTCCCTAGGGCAAGATATTGCTATTCTTGTTGCTGATTCATTTGAAGTACCAAAGAATGAGTTTAAAGATCTCAATTATGTTGTTCAATCATCATCTATACCATTGAATTCTGATCAAATTGAGAAAGTTGATGATGCATGGAAAAAGAATGAGATTGTTTTTAATTTGATTGGAAGTGCTAGAACTATGTCAAGGGTAGGTCATATTGGAGCATTTAAGTTCTTGGTTCATTTGGCTTGTGATCTTAAGTTTCATCCTTTGAATGGGACTTATATTCCTTCAAGGTGCACTTCCAATTCAAAATGA 588 0.3759 MKFKRKLASAGRNDDRTNPLIWLAAVVCTIIAIAVTISVIHPRVPTISITNAHLDLLKNDYAGLLQTQISIVMRAQNGNAKAHATFSNIRFNISSLGQDIAILVADSFEVPKNEFKDLNYVVQSSSIPLNSDQIEKVDDAWKKNEIVFNLIGSARTMSRVGHIGAFKFLVHLACDLKFHPLNGTYIPSRCTSNSK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1782 195 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 11 195 - -
Lal16g1782 195 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1782 Lal-Chr16 16906704 16907318 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1782 - - gmx:100797168 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1782 16 16906704 16907318 Lal16g1782 16 16906704 16907318 ECH
Lal16g0392 16 2364912 2366407 Lal16g1782 16 16906704 16907318 PCT
Lal23g1167 23 13068650 13069288 Lal16g1782 16 16906704 16907318 PCT
Lal16g1782 16 16906704 16907318 Lal16g0392 16 2364912 2366407 PCT
Lal16g1782 16 16906704 16907318 Lal23g1167 23 13068650 13069288 PCT