Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1565 ATGACTAACGTTTCGCTTCCATTAATCCACACCATAATCTTCTACCTCTCCGAACACCCTTCCATCGTGGGGTTCCGATGGAACCACATCCAATCATGGGGCTCCACGTGGTCCTTCCTCTTCACTTCTATCACCACCTATCTCCTCCTCTCACTGTTCCTTCACCTCTCTCTCTCTCTCCTCCTCCGCCGCAACCAACGCATCCCTCTCTGCCCCATTCCAGCCCTCCACAGCCTCTTCATGTCTCTCATCTCAGCCACCATCTTCGCCGGAATACTCCTCTCCGCCACCGCCGAAATCCGCGACACAAGGTGGTTCTGGCGCCGCTCCAAAACCCCACTACAATGGCTCTTCTGTTTCCCTCTCGGAACAAAACCCTCTGGTCGGATTGTCGTTTTTTCAACTTTTCAATCATTCAATCTCCACAGTCATGTCCTTCCTTTGGCTCGAATTCTCACAATCATTTCAAGTTCTTGTGATCCTCTTCACAACTCTGGTCTACTCAGTAGTTTACGCGTACAGATTCTGGACAGATATTGGGTTTCGTGGTGCGTGTTTTCCGTTTGTGTTGAATTGTCAGATTGTGTTGCTGAGTTGCAATGTGTTAACACTGTGCATGACTGTGTTGTAGAGGTTCACGTTCAGATACAGATTCTGAAACTTAGAACAGATATTATCTGCACTGCGGAATACACATCAACAATTGGTCTGGGATGA 717 0.4826 MTNVSLPLIHTIIFYLSEHPSIVGFRWNHIQSWGSTWSFLFTSITTYLLLSLFLHLSLSLLLRRNQRIPLCPIPALHSLFMSLISATIFAGILLSATAEIRDTRWFWRRSKTPLQWLFCFPLGTKPSGRIVVFSTFQSFNLHSHVLPLARILTIISSSCDPLHNSGLLSSLRVQILDRYWVSWCVFSVCVELSDCVAELQCVNTVHDCVVEVHVQIQILKLRTDIICTAEYTSTIGLG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1565 238 PANTHER ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE 11 136 - -
Lal16g1565 238 PANTHER FATTY ACID ACYL TRANSFERASE-RELATED 11 136 IPR002076 GO:0009922|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1565 Lal-Chr16 13083454 13084827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1565 4 134 Acyl Lipid Metabolism Gene Families AT4G36830 66.165 2.44e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1565 - - jre:108995387 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1565 16 13083454 13084827 Lal16g1565 16 13083454 13084827 ECH
Lal15g0143 15 988245 989156 Lal16g1565 16 13083454 13084827 PCT
Lal23g1383 23 14491769 14492695 Lal16g1565 16 13083454 13084827 PCT
Lal16g1565 16 13083454 13084827 Lal15g0143 15 988245 989156 PCT
Lal16g1565 16 13083454 13084827 Lal23g1383 23 14491769 14492695 PCT