Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1564 AAAATAAAAAAATACAACAATACAGTCAAAACTTCTAATAATGACTGTTCTCCATTCTTATGGGACACCTATAAATTAAGTTCCCCATACCATCATTCACTTCATCTTTTATTTCTTTTCAAACAACACCATTCTCTTTTCTCTCTCTCTTCCGTTTCTCAATCTACATCATCCATGGCGTTCAAGAAAACCCTAGCCCAGCGCCTTCTTGGCATCACCAAAATCTCATCGCAATCTCATTCCAATTGCCGCATTTCCTATTCATCCGTTCAATCTCAGATCCCTCCCTCCGTCGCAACCTCCGACATTGCGCCGGATCCCGGAGAATCCGGCGCCATTCGCCGATTTGTACAAAAGAAGTCCGTTAATCTGCCGGAGTTTCGTTCGGTTCCTCCGTCAACCGGTAATATCCTCCGGCTACTTCGGGATATGGACATTGCGAGGAACCGAGTCCGATTCGATGGCCTTACACCGCCGGAATCGAGTGACGGAGTTTCGATAGAGGAGGCGAGGAAGTTTCTTAGAGCGGTGCAGATTGAAACGGTGAAATCGAAACTGAGGAAGATTGAACAAAGTTGTATAAGTTATTCGGAGTTCATTCGAATCTGTGGTGAAAATTGTGAAGATGAAGATCAAGCGATGAAAGTTTCCAAAATGCTAGATGATTCTGCGGTTATAATTATAGTTGGAGACATCGTGTTTCTAAGGCCTGAACAGGTTGCAAAATCAATCCAAGCTCTACTCCCTGTACCAACAATCAAGGCCAACGAGTCAGTAAGAAAAGAACTGGAAGTAATGGAAAAAGAAAAGGCAGCCATTGACAACAAAGCTGACACCTTGGTCCGCCGTGAGCTTTGGGGTGGTTTGGGTTTCATGGTGTTGCAAACAGCAGCATTAATGAGGCTCACATTTTGGGAACTTTCTTGGGATGTAATGGAACCCATATGTTACTATTTAACATCTATGTACTTCATGGGTGGCTACACATTCTTCCTAAGGACCTCAAAAGAACCATCTTTTGAAGCTTTCTACCAAAGCCGTTTTAATACAAAGCAGAAACACCAAATGAAGCTTCACAATTTCGACATTTCAAGGTATAATCAGCTCAGGTCTGCCTCATCCTTCAGTCAACCATTGATGAATAAATTTCACAATAATCTTTAA 1164 0.4244 KIKKYNNTVKTSNNDCSPFLWDTYKLSSPYHHSLHLLFLFKQHHSLFSLSSVSQSTSSMAFKKTLAQRLLGITKISSQSHSNCRISYSSVQSQIPPSVATSDIAPDPGESGAIRRFVQKKSVNLPEFRSVPPSTGNILRLLRDMDIARNRVRFDGLTPPESSDGVSIEEARKFLRAVQIETVKSKLRKIEQSCISYSEFIRICGENCEDEDQAMKVSKMLDDSAVIIIVGDIVFLRPEQVAKSIQALLPVPTIKANESVRKELEVMEKEKAAIDNKADTLVRRELWGGLGFMVLQTAALMRLTFWELSWDVMEPICYYLTSMYFMGGYTFFLRTSKEPSFEAFYQSRFNTKQKHQMKLHNFDISRYNQLRSASSFSQPLMNKFHNNL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1564 387 Pfam Mitochondrial calcium uniporter 210 369 IPR006769 -
Lal16g1564 387 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 59 378 IPR039055 GO:0051560
Lal16g1564 387 Coils Coil 256 283 - -
Lal16g1564 387 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 59 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1564 Lal-Chr16 13072673 13077158 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1564 K20858 - gmx:100785566 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1564 16 13072673 13077158 Lal16g1564 16 13072673 13077158 ECH