Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1543 ATGTGGCGAAGGAGTTTCAGCAGCAGTGCTGCCACTGCCATCGCCGCATTGAAGCATAAAAAATGGGACGCTTTAATTATCGGCGGTGGCCACAATGGCCTAACAGCCGCAGCCTACCTCGCCCGCGGAGGTCTCTCAGTCGCAGTTCTGGAGCGCCGTCACGTCATCGGCGGCGCTGCTGTAACCGAAGATATCATCCCTGGTTTCAAGTTTTCCCGATGCAGTTACCTCCAAAGCCTTCTCCGTCCTTCGATTATAAAGGAACTGGATCTGTCGAAGCATGGATTAAAGCTACTCAAGAGGAGTCCCTCATCGTTTACACCTTGCCTCGATGGAAGGTACCTTCTGTTGGGGCCTGATAAAGAACTCAATCACTCTGAGATTTCGAAATTTTCAAGAAGAGATGCAGAGGCTTATCCAAGATATGAGAGTAAGCTTGAGAACTACTGCAAATTCATGGATCTAGTGTTGGATTCGCCTCCGCCTGAATCCTTGCAGCATAAATCGTCTCTTAATGAACAATTAAAGAATAAAATACAGAATTCAGTATTCTGGGCAAGTTGTCTACGGCAGGCATCCTCACTGGGTCAAAAGGATATGGTGGACTTTATGGACCTTTTGTTGTCCCCAGCTTCTAAAGTTTTGAACAACTGGTTTGAGTCAGATGTTCTGAAGGCAACTCTTGCAACAGATGCTGTGATAGGAAGTACAGCCAGTGTCCACACTGCAGGAAGTGGCTATGTTCTGCTACATCATGTGATGGGAGAAACTGATGGAGATCGTGGAATTTGGTCACATGTTGAAGGTGGAATGGGCTCAATATCCAAGGCTATTGGTAATGCTGCATTGGAAGCAGGAGCACAAGTTATAACCAATGCTGAGGTGTCTCAGTTGTTGATTGACAACTCTAGCACTGTTTGTGGGGTGATTTTGGCTGATGGTACCGAGGTGCATTCTTCAGTCGTTCTATCTAATGCAACTCCTTATAGAACTTTCGTGGAATTAGTGCCTGACAATGTCCTTCCTGATGATTTTGTTCGTGCAATAAAGAACGCTGACTATAGTTCTGCAACGACAAAAATAAATGTAGCAGTTGATAAATTGCCCCAATTTCATAGTTGCAAGCTAGACCATCCTCATGCTGGTCCACAGCATGTTGGCACTATTCATATAGGTTCCGAGAGCATGGAAGAGATTCATTCTGCATCCCAAGATGCGGTGAATGGAGTACCATCAGGAAGACCAATTATGGAGATGACAATTCCCTCTGTACTGGACAAAACTATATCACCACCTGGTAAGCATGTGATCAACCTGTTTGTTCAATATACTCCCTATAAGCCAGTGGATGGTGATTGGCAAGATCATGACTACAGAGAATCATTTGCACAAAAATGCTTCACATTGATTGATGAATATGCCCCGGGCTTCAGCACATCAGTCATTGGTTATGACATGTTGACTCCACCAGATCTCGAAAGGGAAATTGGTTTGAAAGGTGGGAATATATTTCATGGTGCTATGGGTTTGGATTCTCTTTTTCTCATGCGACCTGTGAAAGGATGGTCGAACTACAAGACTCCGCTTCGAGGATTATATTTATGCGGAAGTGGAGCACATCCTGGCGGCGGAGTTATGGGAGCTCCTGGACGTAATGCCGCCCAATTAGTTCTACAAGATAATAGAAAGACCACTTGA 1698 0.4511 MWRRSFSSSAATAIAALKHKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHVIGGAAVTEDIIPGFKFSRCSYLQSLLRPSIIKELDLSKHGLKLLKRSPSSFTPCLDGRYLLLGPDKELNHSEISKFSRRDAEAYPRYESKLENYCKFMDLVLDSPPPESLQHKSSLNEQLKNKIQNSVFWASCLRQASSLGQKDMVDFMDLLLSPASKVLNNWFESDVLKATLATDAVIGSTASVHTAGSGYVLLHHVMGETDGDRGIWSHVEGGMGSISKAIGNAALEAGAQVITNAEVSQLLIDNSSTVCGVILADGTEVHSSVVLSNATPYRTFVELVPDNVLPDDFVRAIKNADYSSATTKINVAVDKLPQFHSCKLDHPHAGPQHVGTIHIGSESMEEIHSASQDAVNGVPSGRPIMEMTIPSVLDKTISPPGKHVINLFVQYTPYKPVDGDWQDHDYRESFAQKCFTLIDEYAPGFSTSVIGYDMLTPPDLEREIGLKGGNIFHGAMGLDSLFLMRPVKGWSNYKTPLRGLYLCGSGAHPGGGVMGAPGRNAAQLVLQDNRKTT 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1543 565 Pfam Flavin containing amine oxidoreductase 33 376 IPR002937 GO:0016491
Lal16g1543 565 Gene3D - 223 369 IPR036188 -
Lal16g1543 565 Gene3D - 21 112 IPR036188 -
Lal16g1543 565 SUPERFAMILY FAD/NAD(P)-binding domain 20 440 IPR036188 -
Lal16g1543 565 PANTHER PHYTOENE DEHYDROGENASE 1 564 - -
Lal16g1543 565 PANTHER FAD/NAD(P)-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 564 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1543 - - gmx:100781247 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1543 16 12699117 12706773 Lal16g1543 16 12699117 12706773 ECH