Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1309 ATGGCAAAGAGTTACTTCAAACAAGAGCATGATCTTGAGAAGAGAAGGGCTGAGGCTGCTAGGATTAGGGAGAAATACCCTGACCGAATTCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGACATACCAAGTATTGACAAGAAGAAGTACCTTGTCCCTGCTGATCTAACAGTTGGACAGTTTGTCTATGTTATCCGCAAAAGGATCAAATTAAGTGCAGAAAAAGCAATTTTTATATTTGTGGACAATGTCCTTCCACCTACAGGAGCAATCATGTCTGCCATATATGAGGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGTGAGAACACCTTTGGGGATCTGATTTGTCACTAG 369 0.4146 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGDLICH 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1309 122 Gene3D - 1 117 - -
Lal16g1309 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Lal16g1309 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Lal16g1309 122 CDD Ubl_ATG8 12 114 - -
Lal16g1309 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Lal16g1309 122 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1309 Lal-Chr16 9263688 9267091 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1309 K08341 - gmx:100499835 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1309 16 9263688 9267091 Lal16g1309 16 9263688 9267091 ECH