Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1298 ATGGCTTCCAAGGCTGCTATTCTCCTTTCCCTGAACATCCTTTTCTTCACTGTGGTTAGCTCCACCTATGTCCCATGCCCACCACCCCCAACACCCAAACACCCATCACCCTCAACACCCAAACACCCATCACCCTCAACACCCAAACAGCCATCACCCCCAACACCCAAACAGCCATCACCCCCAACACCCAAACACCCATCTGCCCCAACCCCTACACCTGCCCCAAAGGCACCATCCTCAAACCCTGCTCCCCCAGAAAAGCAACCTAGTTGTTCCACGGACACCCTTAAGTTTGGTGTGTGTGCTGATGTGTTGGGTCTGGTTATTGGACAACTTGGGAAGACACCAAATGCTCAATGTTGCTCACTCATTGATGGTCTTGCTAATCTTGATGCTGCTGTGTGCCTTTGCACTGCTCTCAAGGCTAATGTTCTTGGAATTAACCTTAACGTTCCTATCAACTTGAGTTTGATACTCAACTACTGTGGAAAGAGTGTTCCCGAGGGATTCCAGTGCGCTTAA 525 0.5029 MASKAAILLSLNILFFTVVSSTYVPCPPPPTPKHPSPSTPKHPSPSTPKQPSPPTPKQPSPPTPKHPSAPTPTPAPKAPSSNPAPPEKQPSCSTDTLKFGVCADVLGLVIGQLGKTPNAQCCSLIDGLANLDAAVCLCTALKANVLGINLNVPINLSLILNYCGKSVPEGFQCA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1298 174 PRINTS Proline rich extensin signature 18 30 - -
Lal16g1298 174 PRINTS Proline rich extensin signature 33 54 - -
Lal16g1298 174 PRINTS Proline rich extensin signature 54 70 - -
Lal16g1298 174 PRINTS Proline rich extensin signature 71 88 - -
Lal16g1298 174 PANTHER LIPID TRANSFER PROTEIN 3 173 - -
Lal16g1298 174 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 95 173 IPR036312 -
Lal16g1298 174 MobiDBLite consensus disorder prediction 26 86 - -
Lal16g1298 174 Pfam Hydrophobic seed protein 92 174 IPR027923 -
Lal16g1298 174 Gene3D - 91 174 IPR036312 -
Lal16g1298 174 MobiDBLite consensus disorder prediction 26 92 - -
Lal16g1298 174 SMART aai_6 92 173 IPR016140 -
Lal16g1298 174 CDD HPS_like 90 173 IPR027923 -
Lal16g1298 174 PANTHER - 3 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1298 Lal-Chr16 9200974 9201498 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1298 81 173 Acyl Lipid Metabolism Gene Families AT4G22490 36.842 1.04e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1298 - - lang:109350042 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1298 16 9200974 9201498 Lal16g1298 16 9200974 9201498 ECH