Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1296 ATGGCTTCCAAGGCTGCTATTCTTCTTTCTCTGAACATCCTTTTCTTCACTGTGGTTAGCTCAACCTATGTTCCATGCCCACCACCCAAATACCCATCTACCCCAAAGGCTCCATCCTCAAACCCTGCTTACCCAAAAAAACAACCTAGTTGTCCCAAGGATACGCTTAAGTTGGGTGTGTGTGCTGATGTGTTGGGTCTGGTTAATGGACAACTTGGGAAGCCACCAAAGGTTCCATGTTGCTCACTCATTGAGGGTCTTGCTAATCTTGAAGCTGCTGTGTGCCTTTGCACTGCACTTAAGGCTAATGTTCTTGGAATTAACCTTAACGTTCCTATCAACTTGAGTTTGATACTCAACTACTGTGGAAAGGGTGTTCCCAAGGGATTCCAGTGCGCTTAA 402 0.4577 MASKAAILLSLNILFFTVVSSTYVPCPPPKYPSTPKAPSSNPAYPKKQPSCPKDTLKLGVCADVLGLVNGQLGKPPKVPCCSLIEGLANLEAAVCLCTALKANVLGINLNVPINLSLILNYCGKGVPKGFQCA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1296 133 CDD HPS_like 49 132 IPR027923 -
Lal16g1296 133 MobiDBLite consensus disorder prediction 31 51 - -
Lal16g1296 133 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 133 - -
Lal16g1296 133 Gene3D - 48 133 IPR036312 -
Lal16g1296 133 Pfam Hydrophobic seed protein 51 133 IPR027923 -
Lal16g1296 133 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 54 132 IPR036312 -
Lal16g1296 133 SMART aai_6 51 132 IPR016140 -
Lal16g1296 133 PANTHER - 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1296 Lal-Chr16 9188814 9189215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g1296 40 132 Acyl Lipid Metabolism Gene Families AT4G22490 37.634 4.78e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1296 - - gmx:100500229 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1296 16 9188814 9189215 Lal16g1296 16 9188814 9189215 ECH